Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst3g02830 | ATGGGTTCGCTCGAAGCACCAACGACTACCGAAAACGGTTCCACCGCCACTCCCGCCGGCAACGGCAAATCTCTGGCCACAGACGGCACTGCACGTGTTCCTCCTCCGGAGATGACGTCGGAGAAGCCTCCGGATTCGGACTCATCGAAGCGCCGGAGATCGTCGGTGCTTCCCCTGGAGGTCGGGACGAGGGTTATGTGCCGGTGGAGGGACGGCAAATACCACCCTGTCAAGGTCATCGAACGCCGCAAGGTTTCTTCCAGTGACCCCAACGATTACGAGTATTACGTTCATTACACAGAGTTTAATAGAAGGCTTGATGAGTGGGTGAAGCTTGAACAGCTTGATCTTGAGTCAGTAGAGGCTGTTGTTGATGAGAAAGTGGAGGAGAAGGGGGCAACAGGCTTGAAGATGACACGCCACCAGAAGAGGAAGATTGATGAGACACATGTAGAGGGCCACGAGGAGCTTGATGCTGCCAGTTTGCGAGAACACGAGGAATTTACCAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCCTTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAATTTTGCCTCAATTTCATGAAACGGAAAGAACAGCTTCAGAGGCATATGAGAAAATGTGATCTTAAGCATCCCCCCGGTGATGAAATATACAGAAGTGGTACCCTGTCAATGTTTGAGGTTGACGGGAAGAAGAACAAGGTTTATGGCCAGAATCTGTGTTATTTGGCAAAGTTGTTTCTTGATCACAAGACCCTCTATTATGATGTAGACCTATTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGATGCCACATGGTTGGCTATTTCTCTAAGGAAAAACATTCCGAGGAATCCTACAATTTGGCATGTATCCTCACGCTTCCACCTTACCAAAGGAAAGGTTATGGCAAATTTCTAATAGCCTTCTCATATGAACTTTCCAAGAAGGAGGGCAAAGTTGGCACGCCAGAAAGACCCCTTTCAGATCTTGGCCTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTCTTGGACATTCTGAAAAAGCACAAGGGTAACATTTCCATCAAGGAGCTAAGTGATATGACTGCCATTAAAGCCGAAGATATATTGACAACTCTTCAGAGCCTAGAATTGATACAATACAGGAAAGGACAGCATGTTATTTGTGCAGATCCTAAGGTTCTTGATCGCCATCTTAAAGCTGCTGGTAGAGGGGGTCTTGAGGTTGATGTTAGCAAATTGATCTGGACCCCTTACAAGGAACAAAGTTGA | 1338 | 0.4626 | MGSLEAPTTTENGSTATPAGNGKSLATDGTARVPPPEMTSEKPPDSDSSKRRRSSVLPLEVGTRVMCRWRDGKYHPVKVIERRKVSSSDPNDYEYYVHYTEFNRRLDEWVKLEQLDLESVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQS | 445 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst3g02830 | 445 | CDD | CBD_MOF_like | 62 | 131 | - | - | |
| Arst3g02830 | 445 | Gene3D | - | 348 | 428 | IPR036388 | - | |
| Arst3g02830 | 445 | Gene3D | - | 170 | 226 | - | - | |
| Arst3g02830 | 445 | Gene3D | - | 47 | 169 | - | - | |
| Arst3g02830 | 445 | Gene3D | - | 228 | 440 | - | - | |
| Arst3g02830 | 445 | FunFam | Histone acetyltransferase | 168 | 225 | - | - | |
| Arst3g02830 | 445 | Pfam | MOZ/SAS family | 230 | 407 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Arst3g02830 | 445 | FunFam | Histone acetyltransferase | 49 | 169 | - | - | |
| Arst3g02830 | 445 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Arst3g02830 | 445 | PANTHER | HISTONE ACETYLTRANSFERASE | 62 | 441 | - | - | |
| Arst3g02830 | 445 | Pfam | MYST family zinc finger domain | 171 | 225 | IPR040706 | - | |
| Arst3g02830 | 445 | Pfam | RNA binding activity-knot of a chromodomain | 59 | 117 | IPR025995 | - | |
| Arst3g02830 | 445 | SUPERFAMILY | Chromo domain-like | 52 | 170 | IPR016197 | - | |
| Arst3g02830 | 445 | FunFam | Histone acetyltransferase | 348 | 427 | - | - | |
| Arst3g02830 | 445 | SMART | chromo_7 | 73 | 132 | IPR000953 | - | |
| Arst3g02830 | 445 | CDD | NAT_SF | 281 | 339 | - | - | |
| Arst3g02830 | 445 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
| Arst3g02830 | 445 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 169 | 440 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Arst3g02830 | 445 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 170 | 441 | IPR016181 | - | |
| Arst3g02830 | 445 | FunFam | Histone acetyltransferase | 228 | 356 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Arst3g02830 | 16 | 445 | C2H2 Transcription Factor Family | AT5G64610 | 86.605 | 0.0 | 782 |