Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02799 ATGGCGGAAGCAAACGGCGACGTTTTCCAGTGGCTGAAGTCGATGCCGTTAGCGCCGGAGTACAGGCCGACACTAACGGAATTCCAAGATCCGATCGCCTACATTTTCAAGATCGAGAAGGAAGCTTCCAAGTACGGAATCTGCAAGATCATACCGCCGTTTCCACCGCCGCCGAGGAAGGTTGCAATTGCCAACTTCACTCGCTCGCTGACTAAGCCCGACGAGCCTAACTCAAAGCCTACATTCACCACTCGCCAGCAGCAGATCGGGTTCTGCCCCCGCCGGCCCAGGCCCGTTCAGAGGCCCGTGTGGCAAAGCGGTGAGAACTACACTTTTCAGGAATTCGAGGCTAAGGCCAAAGCATTCGAGAAGAGCTACCTCAAGAAGCATCATCTTCACCACCAAGGCCACCGGAAGGGAGGAGGAGGTGGTGGTGGTTCCGGTGGCCTAGGGCCTCTCGAGGTGGAGACGCTGTTCTGGAAGGCGACCGTTGACAAGCCGTTCTCGGTGGAGTATGCGAACGACATGCCGGGCTCGGCGTTCAGCCGGAAATGCAGGGAGGAGTGTGCGGCGGCGCTAGCGGAGTCGGCGTGGAATATGAGGGAGATTTCGAGGGCGAATGGTTCTTTGTTGAGGTTCATGAAGGAGGAGATACCTGGTGTTACTTCTCCTATGGTGTATTTGGCTATGTTGTTCAGCTGGTTCGCTTGGCATGTTGAGGACCATGACCTCCATAGCTTGAATTACCTTCACATGGGTTCTGGGAAGACCTGGTATGGCGTGCCGAGAGATGCAGCCGTTGCGTTCGAAGATGTTGTTAGGGTTCATGGATATGGCTCTGAGATTAATCCTCTTGTTACTTTTTCTACTCTTGGCGAGAAAAACACAGTGATGTCACCTGAAGTATTGATAAACGCAGGTGTTCCATGCTGCAGGTTGGTTCAAAATGCTGGGGAGTTTGTTGTGACTTTTCCAAGAGCTTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCCAATATTGCAACGCCTGAATGGTTGAGAGTTGCAAAAGATGCTGCTATTCGGAGGGCTTCAGTAAATCATTCTCCTATGGTTTCACATTTCCAGTTACTTTATGACCTAGCCTTAGCTTTGTGTTCTAGGTTTGTCTTCTGCTATTATGGCTTCTTACTTTTGGCTGTAACAGGGTGGGTGGTCCTTGTTGAGGACTTAATGTCACTCCCCCAATATGATTTGCTCATACATGTGTTCTCTCCTCACGCACTCAAAATTCCAGAACTATTTGTCCAGGATGTGTCACAGAATAATGATCTGCTTCAAGAACTCAGCAAGGGATCTGAGATTATACTTCTACCTCGTAGCTCATTTGACATTTCTCTTTGCTCAAAATTACGATCTGGATCCAAACAACGGAAAGTGAACTCTCGATTTTCCCTTGGTGCATGCAACTCCGAGGAAATGAATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGCATTCAGCATGAACAGAGGAATCAAGCAAGAAGGTTCCCTTTCTATAAAAGACAAGATTACTTCATTGTGTGAAAGGAGCATGATTTCCTCATATGATGTAAATGGCAACATCTGCTCTTCAAGTTCCAAGCAACTTCAAGGTGACAATGAAAGAGAAAGTGGTGAAGGGGATGGTTCGCCAGATAAGAGACTTTTTTCATGTGTCACATGCGGAATATTGTGCTTTCCTTGTGTAGCTATTGTACAGCCTAGAGAATCTGCTGCTAGATATCTCATGTCAGCTGATTGTAGTTTCTTTAACGATTGGGTTGTTGGTTCTGGAGTGTCTAGCAAAAAGTTTATTGCCCATGAAGAAGCGGCTTTTCCTGAACCAAGTATGTATGCAGGGTGGACAGAAAAGAAGACCCAAGGATTGTATCAGGATCCTGTTCAATCTGCCCAGTATCAGCTACAGACTGCTGAGCGTAATTATGAGGAGTCCCTTGGAAAAAGCAATACAGCTCTTGCATTGTTGGCTTCAACATATGGAAATTCTTCCGACTCTGAGGAAGAGCATGGTGACTCAGATATTGTAGTTGATGGTCATGAATCACCTATGATTAATGCCACATTAGGAGGATCACCATCTAATTTTCAAGATGGCTGTACTATTCCCCTCACTGGACCTGATAGCAGAAATGATTTTAGTCATCAATCTTTTGACCACTCTTTAGAAAAACAGGATTGTGATACTTCTTCAGGGTTTGCATTAAAAAATATGAGGGCAATGTATACCAATGATACTGAAAAAACATTGTTGGGCAAGGCTATGGTTCCAAATGATGATAAAAATGCCTCAGTGATGCCACAAGGTGATCAAGACTCATCTAGAATGCATGTCTTCTGTCTGGAGCATGCTGTAGAAGCAGAGCAGCAACTTCGCCCAATAGGTGGAGCCCACATAATGCTCCTATGTCATCCAGATTTCCCCAAGATAGAGGCTGAAGCTAAGCTTGTAGCAGAAGATCTTGGGATTGATTACCTGTGGAAGAAGATTGAGTACAGGCATTCCAGCAAGGAGGATGAGGAGAGGATCCAGGTAGCCCTGGATAGTGAGGAAGCTATTCCTGGGAATGGGGACTGGTGTGTGAAGCTGGGAATCAATCTTTTCTACAGTTCAACTCTTAGCCGTTCTCCTCTTTACAGTAAGCAGATGCCTTACAATTCTGTCATATATTATGCATTTGGCCAAAGCTCTCCAGCAAGTTCACCATTAGAACCAAAGGTCTATCAGAGAAGGGTTAACAAGCAGAAAAAGATAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAGTCAGGTACATCCTCTTTTGGCCAAAAGAGATTCTGAAGATGTTGAAGATGAGAAAAGCTTACATGGGTGGGGATTACATGATGAGAAAATAGAGAGATCAGGAAGCATCCCTAAAAGCGAAACTAGTGCCAGAAAATCAGGTAAGAAGCGGAAAATGACTATTGAGAATGGAAGAGCCAGGAAAGGCAGTTTTGCTGAGAGAGATGTGGATTTGGATAATCCAACTGAAGACAAACCTAACCAACAGCTGAGGAGGACTCTTAGAAGTAAGCAAGCCAGGGATATTGAGAGTGAAGGTGCGGATTTGGAAGGGGATTATTCTCCCCCATATCATAGAAAACCTTTAAGTGACCAAACAAATTGCACAGGAAGTGATGCAGTTTCTGATGATTCACTTGATGATAAATTTATTGACAATGATGTGGTTTCAGATGATACAATGGTCTATGATTCTGATTGCCATCAGAGATTTGAACATAGCAGCATGCAAGTTGAAGACATAGAAGATGCAGTTTCTGAGGATTCATTGGATGACGGTTCTCTTCAGCTTCATAGGAAGAATTCTAAAAGCAAGCATGCCAGATACATTAGAAAAGGCAGATGCATTGCTGAGAAAGAGGAAATGATGTCTGATGACCAATTGGAGCCACACAAGAAGAACAAGCAACAGAGGAATCCTAAAAGCAGGCAAGCGAAATACCTTGCAAGAGAAGATGCTATATCACATGGTCAATTGGAAGGACATTGTCGCAAGTATAGAAAGACTCCTAAAGGTAGGCTGGCCAAATATGTAGCAGGGGAAGATGTATCATCTGATGAGCAATTGGAGAATTACAGTCGGAAGCAGCAAACAAGTCTTCCTAAAAGGCAGAAAAACAAAGGTGTATTGACTGATGACCAATTGGAGGACCATTTTCAGAAGCAGCAAAAGAGTGTTTCTAGGCGAAGGCAAAACAAAGGCATTGAAAGAGGGGTTAAAGACGAAATGTCTGATGACCAATTAGAGGATCACGTTCAGAAGCAGCAAACTAGTGTTTCTAAGAGAAGGCGAAACAAACAAATTGAAAGAGATGATGTAATGTCTGATGATGAAATGGAGGATCATTTTCAGAAGCAGCGGAGTAGTATTCCTAGAAATAGGCAAAACAGTAATTCTCATCTGGCCCATAAAACTCCTAAACGAAAGCAAGCGAAATGCGTTGATGATGATGATGGTGATGATGATGATGTAAATTCTGACGATGAAGTGGAAGATGATTCTCAGCAGAAGCAGCAGAGAACTCTTAGAAGTAAGCAATCAAAACCAATGACACTCAAGCAGATGAAGCAAGCTCGCTCTCTCCAAATGAAAAATCAGACATCCCGGTCTGTAAAACGAGGTGCTCAGACACTTAAGAAATTAAAGGCATCTCAGATTCGGAATAAGCAATCTGGTAAATCCAGAGAGTTTAGTTTGAAAATGGAAGAGGGGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGCCCCAAAAGTCGAGGAGTCTGATGGAATATCAAAAGAAAAGCAAACCAAAAAGAAAAGGGTGAAGAATGCTACATCTGCAAAGGCAGCTAGCAATGCTAAAGTGAAGGATGAGGAAAATGAATTCCAGTGTGACATTGATGGCTGCACCATGAGTTTTGGGTCAAAACAGGAGCTGATGCATCACAAGAGAAATATATGTCCTGTAAAAGGTTGCGGGAAGAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGACGAGTTCACGAGGATGACCGCCCATTGAAGTGCCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACAGAACATATTCGAGTCCACACTGGTGCGCGACCGTATGTATGTGCCGAGCCAGGCTGTGGGCAAACATTCAGATTTGTGTCTGATTTCAGTCGCCATAAGCGTAAGACTGGGCACTCAACAAAGAAGAGTCGTTAA 4827 0.445 MAEANGDVFQWLKSMPLAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPRKVAIANFTRSLTKPDEPNSKPTFTTRQQQIGFCPRRPRPVQRPVWQSGENYTFQEFEAKAKAFEKSYLKKHHLHHQGHRKGGGGGGGSGGLGPLEVETLFWKATVDKPFSVEYANDMPGSAFSRKCREECAAALAESAWNMREISRANGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEDVVRVHGYGSEINPLVTFSTLGEKNTVMSPEVLINAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASVNHSPMVSHFQLLYDLALALCSRFVFCYYGFLLLAVTGWVVLVEDLMSLPQYDLLIHVFSPHALKIPELFVQDVSQNNDLLQELSKGSEIILLPRSSFDISLCSKLRSGSKQRKVNSRFSLGACNSEEMNSSKGFVSDDLAFSMNRGIKQEGSLSIKDKITSLCERSMISSYDVNGNICSSSSKQLQGDNERESGEGDGSPDKRLFSCVTCGILCFPCVAIVQPRESAARYLMSADCSFFNDWVVGSGVSSKKFIAHEEAAFPEPSMYAGWTEKKTQGLYQDPVQSAQYQLQTAERNYEESLGKSNTALALLASTYGNSSDSEEEHGDSDIVVDGHESPMINATLGGSPSNFQDGCTIPLTGPDSRNDFSHQSFDHSLEKQDCDTSSGFALKNMRAMYTNDTEKTLLGKAMVPNDDKNASVMPQGDQDSSRMHVFCLEHAVEAEQQLRPIGGAHIMLLCHPDFPKIEAEAKLVAEDLGIDYLWKKIEYRHSSKEDEERIQVALDSEEAIPGNGDWCVKLGINLFYSSTLSRSPLYSKQMPYNSVIYYAFGQSSPASSPLEPKVYQRRVNKQKKIVAGKWCGKVWMSSQVHPLLAKRDSEDVEDEKSLHGWGLHDEKIERSGSIPKSETSARKSGKKRKMTIENGRARKGSFAERDVDLDNPTEDKPNQQLRRTLRSKQARDIESEGADLEGDYSPPYHRKPLSDQTNCTGSDAVSDDSLDDKFIDNDVVSDDTMVYDSDCHQRFEHSSMQVEDIEDAVSEDSLDDGSLQLHRKNSKSKHARYIRKGRCIAEKEEMMSDDQLEPHKKNKQQRNPKSRQAKYLAREDAISHGQLEGHCRKYRKTPKGRLAKYVAGEDVSSDEQLENYSRKQQTSLPKRQKNKGVLTDDQLEDHFQKQQKSVSRRRQNKGIERGVKDEMSDDQLEDHVQKQQTSVSKRRRNKQIERDDVMSDDEMEDHFQKQRSSIPRNRQNSNSHLAHKTPKRKQAKCVDDDDGDDDDVNSDDEVEDDSQQKQQRTLRSKQSKPMTLKQMKQARSLQMKNQTSRSVKRGAQTLKKLKASQIRNKQSGKSREFSLKMEEGEEGGPSTRLRKRAPKVEESDGISKEKQTKKKRVKNATSAKAASNAKVKDEENEFQCDIDGCTMSFGSKQELMHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR 1608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1428 1466 - -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1179 1200 - -
Arst3g02799 1608 Pfam JmjC domain, hydroxylase 225 343 IPR003347 -
Arst3g02799 1608 ProSitePatterns Zinc finger C2H2 type domain signature. 1518 1540 IPR013087 -
Arst3g02799 1608 FunFam Probable lysine-specific demethylase ELF6 11 365 - -
Arst3g02799 1608 FunFam Probable lysine-specific demethylase ELF6 1573 1602 - -
Arst3g02799 1608 ProSiteProfiles Zinc finger C2H2 type domain profile. 1576 1607 IPR013087 -
Arst3g02799 1608 ProSitePatterns Zinc finger C2H2 type domain signature. 1548 1570 IPR013087 -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1351 1365 - -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1225 1240 - -
Arst3g02799 1608 Coils Coil 1472 1492 - -
Arst3g02799 1608 Pfam jmjN domain 19 52 IPR003349 -
Arst3g02799 1608 Gene3D Cupin 11 366 - -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1375 1409 - -
Arst3g02799 1608 FunFam Probable lysine-specific demethylase ELF6 1543 1572 - -
Arst3g02799 1608 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 1258 - -
Arst3g02799 1608 SMART JmjN_1 17 58 IPR003349 -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 991 1059 - -
Arst3g02799 1608 SMART cupin_9 192 361 IPR003347 -
Arst3g02799 1608 SUPERFAMILY beta-beta-alpha zinc fingers 1516 1552 IPR036236 -
Arst3g02799 1608 SUPERFAMILY beta-beta-alpha zinc fingers 1556 1600 IPR036236 -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1154 1485 - -
Arst3g02799 1608 ProSiteProfiles JmjC domain profile. 192 361 IPR003347 -
Arst3g02799 1608 ProSiteProfiles Zinc finger C2H2 type domain profile. 1546 1575 IPR013087 -
Arst3g02799 1608 ProSiteProfiles Zinc finger C2H2 type domain profile. 1516 1545 IPR013087 -
Arst3g02799 1608 ProSitePatterns Zinc finger C2H2 type domain signature. 1578 1602 IPR013087 -
Arst3g02799 1608 SUPERFAMILY Clavaminate synthase-like 103 357 - -
Arst3g02799 1608 SMART c2h2final6 1516 1540 IPR013087 -
Arst3g02799 1608 SMART c2h2final6 1546 1570 IPR013087 -
Arst3g02799 1608 SMART c2h2final6 1576 1602 IPR013087 -
Arst3g02799 1608 SMART c2h2final6 1493 1515 IPR013087 -
Arst3g02799 1608 Gene3D Classic Zinc Finger 1514 1600 - -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1241 1323 - -
Arst3g02799 1608 ProSiteProfiles JmjN domain profile. 18 59 IPR003349 -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1062 1076 - -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 1154 1170 - -
Arst3g02799 1608 MobiDBLite consensus disorder prediction 974 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02799 Arst-Chr3 42008722 42017732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02799 1229 1607 C2H2 Transcription Factor Family AT3G48430 40.521 3.45e-71 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g02799 JmjC 4.2e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02799 - - aip:107632400 3005.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02799 3 42008722 42017732 Arst3g02799 3 42008722 42017732 ECH