Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02794 ATGCGTCCCGAGGCACTAGTGTGTGAAGAATGCGCCTGCAGGTGTGTTTTGTTGCACGGAAACGAGAAGAAAAAATCGTCACTTTTTCCTCCTTCTTTCTTCAAGATCATGTTTGACTCGAACTTTTCCACTATTATGTATCTTCCTGACAAGTTTAAACCTGCTGTAGCTGCCTCCGTTAATAAGAAAATCATTCTTGATGACAAAAGTGGGGAGAGATGGAAAGTAACTTTATCCGAAGCCGGTAGTCACTTGGCTTTCAAGGAAGGATGGAATAAGTTTTCGTCGGACCATGGACTTGAACGTGGAGATATTCTGGTATTCCATCATGTTACTGATGTGCACTTTTATGTTACAATCTATGATAAATATGCTTGTGAAAAGCTTTGTTGTTCGAATACGAGAAATAAGACAAAACGTAGAAGGGACAGTAGTGTCTCTCCAGTTAGAGATGTCATGTTGGCTACACCAGATCAAAATGCGTCGGTTGTTTCTGAGCCAGATGCTAAAAAGACAAATAGTCAGAACAAAGTGGTTGGTGTAGGAGGAACACCAAATAATGTAGAGAATATTTCAAAACATGATAAGAGCAATGGAAGTGTCAAATCTACGAGAATGACAGAAAACTATGACAACACTGCGAAAATTACAGCCAGAGAATCAAGAGTTTCTCCTGTCAACTACAAATTGTGCATGAATCCAGTCGATGCAATTCTATGCGACAACTCTCCTTCATTTGAAGAGAGATTCAGAGGAGCTGCTGCATTTTTGTCAGAAGCTGAACTATCTGGAAAAAGGGATTCTATTAGAAATACTGACAGAAGCAGATACGACAATACTTCTACTTGCAAACTTGGAGAAAGAAAAGAGAAGAATGTTTTGAAAAGGGAAGTTAGAGAGTTCCAATATACTGAGGACTTAGAAGGTGATAATAAGGTGGCAATGTCCAAGAAAGAACATGGCTTTCATATTGATGGATGTCTCAACACCAAACCAATGTTTAATGCCACACCGAATATCTCAGATGCTACTCGACTCAAAAGTGATCCTATGGCAACGTCCAAGGGAAAACATGGATTGCAAATTGATGGATGCCCCAATACCAAACATATTGTCAATAATGGCATACCAAGGGTCTCAAGTGCTATTCAAAACGGCAAAATCTTAAAAAAGATTAAGAGCGAGCAGGCAGACAGGAATCCCAGTGAGGAGTGCACTTTTAAGGACAAAGTGTGTGCAAAAGGTGAAATGCCCAAAAGGATTAAAAAAGAGCCGCGTATGGATATGACTTACAACGTGTCCAGATTCAAGGATGAATTCGAAGCCAGAGGTATTGAAGTTCCCAAAGGCTTGCCAAAGGTTATCAAGAAAGAGTTTGAGAAGAGTTCACACAAGACTGAACAAAATGATGATAACGATGATGACAGTGATAACATTCAATTGGCAGAAGTTGTGCGCTGCGTGGTGCCCGATCATAATGATAAATTTCTTGAATTGCCTACAAACTTGCATCAGTGCCGGAACTACAAAAATAACAGGATGGTGGTGATCCTGCGAGATCCGCAGAGGAGACTATGGCCGGTTCTTTACCATGATCTTCATGATAAAAAAATGCATGGTACAAAAGCCTTTTATCTGATAAAAGGGTGGTCACAATTTTACAGAGCCAATAATGTTCAACCAGGAGATTTGTGTACTTTTGAACTTAAGGAGGAGGCTAAACACATCTTCAATGTAGATATAAACCACAATTAA 1755 0.3977 MRPEALVCEECACRCVLLHGNEKKKSSLFPPSFFKIMFDSNFSTIMYLPDKFKPAVAASVNKKIILDDKSGERWKVTLSEAGSHLAFKEGWNKFSSDHGLERGDILVFHHVTDVHFYVTIYDKYACEKLCCSNTRNKTKRRRDSSVSPVRDVMLATPDQNASVVSEPDAKKTNSQNKVVGVGGTPNNVENISKHDKSNGSVKSTRMTENYDNTAKITARESRVSPVNYKLCMNPVDAILCDNSPSFEERFRGAAAFLSEAELSGKRDSIRNTDRSRYDNTSTCKLGERKEKNVLKREVREFQYTEDLEGDNKVAMSKKEHGFHIDGCLNTKPMFNATPNISDATRLKSDPMATSKGKHGLQIDGCPNTKHIVNNGIPRVSSAIQNGKILKKIKSEQADRNPSEECTFKDKVCAKGEMPKRIKKEPRMDMTYNVSRFKDEFEARGIEVPKGLPKVIKKEFEKSSHKTEQNDDNDDDSDNIQLAEVVRCVVPDHNDKFLELPTNLHQCRNYKNNRMVVILRDPQRRLWPVLYHDLHDKKMHGTKAFYLIKGWSQFYRANNVQPGDLCTFELKEEAKHIFNVDINHN 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02794 584 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 31 576 IPR039218 -
Arst3g02794 584 Pfam B3 DNA binding domain 33 123 IPR003340 GO:0003677
Arst3g02794 584 Pfam B3 DNA binding domain 498 573 IPR003340 GO:0003677
Arst3g02794 584 MobiDBLite consensus disorder prediction 159 194 - -
Arst3g02794 584 CDD B3_DNA 493 581 IPR003340 GO:0003677
Arst3g02794 584 SUPERFAMILY DNA-binding pseudobarrel domain 487 574 IPR015300 -
Arst3g02794 584 MobiDBLite consensus disorder prediction 343 363 - -
Arst3g02794 584 Gene3D - 27 126 IPR015300 -
Arst3g02794 584 Gene3D - 480 584 IPR015300 -
Arst3g02794 584 MobiDBLite consensus disorder prediction 159 204 - -
Arst3g02794 584 ProSiteProfiles B3 DNA-binding domain profile. 482 584 IPR003340 GO:0003677
Arst3g02794 584 SUPERFAMILY DNA-binding pseudobarrel domain 30 126 IPR015300 -
Arst3g02794 584 CDD B3_DNA 31 122 IPR003340 GO:0003677
Arst3g02794 584 SMART B3_2 33 124 IPR003340 GO:0003677
Arst3g02794 584 SMART B3_2 484 580 IPR003340 GO:0003677
Arst3g02794 584 ProSiteProfiles B3 DNA-binding domain profile. 31 124 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02794 Arst-Chr3 41951891 41956641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02794 33 127 B3 DNA Binding Superfamily AT4G01580 28.125 8.54e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g02794 B3 1.9e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02794 - - adu:107478866 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02794 3 41951891 41956641 Arst3g02794 3 41951891 41956641 ECH