Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02793 ATGCGTCCCGAGGCACTAGTGTGTGAAGAATGCGCCTGCAGGTGTGTTTTGTTGCACGGAAACGAGAAGAAAAAATCGTCACTTTTTCCTCCTTCTTTCTTCAAGATCATGTTTGACTCGAACTTTTCCACTATTATGTATCTTCCTGACAAGTTTAAACCTGCTGTAGCTGCCTCCGTTAATAAGAAAATCATTCTTGATGACAAAAGTGGGGAGAGATGGAAAGTAACTTTATCCGAAGCCGGTAGTCACTTGGCTTTCAAGGAAGGATGGAATAAGTTTTCGTCGGACCATGGACTTGAACGTGGAGATATTCTGGTATTCCATCATGTTACTGATGTGCACTTTTATGTTACAATCTATGATAAATATGCTTGTGAAAAGCTTTGTTGTTCGAATACGAGAAATAAGACAAAACGTAGAAGGGACAGTAGTGTCTCTCCAGTTAGAGATGTCATGTTGGCTACACCAGATCAAAATGCGTCGGTTGTTTCTGAGCCAGATGCTAAAAAGACAAATAGTCAGAACAAAGTGGTTGGTGTAGGAGGAACACCAAATAATGTAGAGAATATTTCAAAACATGATAAGAGCAATGGAAGTGTCAAATCTACGAGAATGACAGAAAACTATGACAACACTGCGAAAATTACAGCCAGAGAATCAAGAGTTTCTCCTGTCAACTACAAATTGTGCATGAATCCAGTCGATGCAATTCTATGCGACAACTCTCCTTCATTTGAAGAGAGATTCAGAGGAGCTGCTGCATTTTTGTCAGAAGCTGAACTATCTGGAAAAAGGGATTCTATTAGAAATACTGACAGAAGCAGATACGACAATACTTCTACTTGCAAACTTGGAGAAAGAAAAGAGAAGAATGTTTTGAAAAGGGAAGTTAGAGAGTTCCAATATACTGAGGACTTAGAAGGTGATAATAAGGTGGCAATGTCCAAGAAAGAACATGGCTTTCATATTGATGGATGTCTCAACACCAAACCAATGTTTAATGCCACACCGAATATCTCAGATGCTACTCGACTCAAAAGTGATCCTATGGCAACGTCCAAGGGAAAACATGGATTGCAAATTGATGGATGCCCCAATACCAAACATATTGTCAATAATGGCATACCAAGGGTCTCAAGTGCTATTCAAAACGGCAAAATCTTAAAAAAGATTAAGAGCGAGCAGGCAGACAGGAATCCCAGTGAGGAGTGCACTTTTAAGGACAAAGTGTGTGCAAAAGGTGAAATGCCCAAAAGGATTAAAAAAGAGCCGCGTATGGATATGACTTACAACGTGTCCAGATTCAAGGATGAATTCGAAGCCAGAGGCTTGCCAAAGGTTATCAAGAAAGAGTTTGAGAAGAGTTCACACAAGACTGAACAAAATGATGATAACGATGATGACAGTGATAACATTCAATTGGCAGAAGTTGTGCGCTGCGTGGTGCCCGATCATAATGATAAATTTCTTGAATTGCCTACAAACTTGCATCAGTGCCGGAACTACAAAAATAACAGGATGGTGGTGATCCTGCGAGATCCGCAGAGGAGACTATGGCCGGTTCTTTACCATGATCTTCATGATAAAAAAATGCATGGTACAAAAGCCTTTTATCTGATAAAAGGGTGGTCACAATTTTACAGAGCCAATAATGTTCAACCAGGAGATTTGTGTACTTTTGAACTTAAGGAGGAGGCTAAACACATCTTCAATGTAGATATAAACCACAATTAA 1737 0.3978 MRPEALVCEECACRCVLLHGNEKKKSSLFPPSFFKIMFDSNFSTIMYLPDKFKPAVAASVNKKIILDDKSGERWKVTLSEAGSHLAFKEGWNKFSSDHGLERGDILVFHHVTDVHFYVTIYDKYACEKLCCSNTRNKTKRRRDSSVSPVRDVMLATPDQNASVVSEPDAKKTNSQNKVVGVGGTPNNVENISKHDKSNGSVKSTRMTENYDNTAKITARESRVSPVNYKLCMNPVDAILCDNSPSFEERFRGAAAFLSEAELSGKRDSIRNTDRSRYDNTSTCKLGERKEKNVLKREVREFQYTEDLEGDNKVAMSKKEHGFHIDGCLNTKPMFNATPNISDATRLKSDPMATSKGKHGLQIDGCPNTKHIVNNGIPRVSSAIQNGKILKKIKSEQADRNPSEECTFKDKVCAKGEMPKRIKKEPRMDMTYNVSRFKDEFEARGLPKVIKKEFEKSSHKTEQNDDNDDDSDNIQLAEVVRCVVPDHNDKFLELPTNLHQCRNYKNNRMVVILRDPQRRLWPVLYHDLHDKKMHGTKAFYLIKGWSQFYRANNVQPGDLCTFELKEEAKHIFNVDINHN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02793 578 SUPERFAMILY DNA-binding pseudobarrel domain 30 126 IPR015300 -
Arst3g02793 578 Pfam B3 DNA binding domain 33 123 IPR003340 GO:0003677
Arst3g02793 578 Pfam B3 DNA binding domain 492 567 IPR003340 GO:0003677
Arst3g02793 578 MobiDBLite consensus disorder prediction 159 194 - -
Arst3g02793 578 SUPERFAMILY DNA-binding pseudobarrel domain 481 568 IPR015300 -
Arst3g02793 578 SMART B3_2 33 124 IPR003340 GO:0003677
Arst3g02793 578 SMART B3_2 478 574 IPR003340 GO:0003677
Arst3g02793 578 MobiDBLite consensus disorder prediction 343 366 - -
Arst3g02793 578 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 31 570 IPR039218 -
Arst3g02793 578 ProSiteProfiles B3 DNA-binding domain profile. 476 578 IPR003340 GO:0003677
Arst3g02793 578 MobiDBLite consensus disorder prediction 159 204 - -
Arst3g02793 578 CDD B3_DNA 487 575 IPR003340 GO:0003677
Arst3g02793 578 CDD B3_DNA 31 122 IPR003340 GO:0003677
Arst3g02793 578 Gene3D - 27 126 IPR015300 -
Arst3g02793 578 Gene3D - 474 578 IPR015300 -
Arst3g02793 578 ProSiteProfiles B3 DNA-binding domain profile. 31 124 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02793 Arst-Chr3 41951891 41956641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02793 33 127 B3 DNA Binding Superfamily AT4G01580 28.125 7.25e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst3g02793 B3 1.8e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02793 - - adu:107478866 1172.53