Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02790 TTTATTGTTCGTGTTTCTTCATCCAGTTCACCCATACATCCGAACCAGGGATATGCAGATGAAAGAATTCTCAAACCGGAACAAGAGCATGTCCATGAAGTGCATTGCTCTAGAGAAAGGAGCAGGGCAGCTAGGAAAGTAATTGAGGAGTATTTGACACCATTTTTGGAGCAAGAAAACTATCAGCTTTCAAGCAAGTGCAGACTTCACCCTGAAAATGACATGTTTAGGGATCAAGAAGAGCATAAAATTTGCCTAGGCTTTCATGACTGGAAGTGCGGATATTGTAAGAAAAGCTTCCGAGATGAGAAGTTTCTTGATCAGCATTTTGATAACAGACACTCCAATCTTCTCAATTTAAGTGATGGGAAGTGCTTGGCTGATTTATGTGGGGCATTGCATTGCGATGCTGTGATGAACAGGAAGTTCTCTAGAAGCAAGTGTAATCCAGCTGCTGCCACGAGGAATAAACACCTATGTGAGAGTCTTGCTGAGAGTTGTTTTCCTGTAAGTGATGGTCCATCTGCAAGTCGTCTTCACGAAATATTTTTACACCAATTTTGTGAGGCCCATACCTGCTCAGGGAAACAGAAACCCTTCTCTAGAGGAGGTAAGGTACAAAAAAGTATCTTCGTTGTGGTTTCTGGAGCATTGATCTTGGTGCTACTTCCTTTGTTCTATCTTTTCCTTTATCTGGTACAAAGAGATATGAAGAGTAGTACTCAAGAACTTCGCCGCATCTCAAAAATGGGACGGAAATCAAAGCCATCATGA 774 0.4173 FIVRVSSSSSPIHPNQGYADERILKPEQEHVHEVHCSRERSRAARKVIEEYLTPFLEQENYQLSSKCRLHPENDMFRDQEEHKICLGFHDWKCGYCKKSFRDEKFLDQHFDNRHSNLLNLSDGKCLADLCGALHCDAVMNRKFSRSKCNPAAATRNKHLCESLAESCFPVSDGPSASRLHEIFLHQFCEAHTCSGKQKPFSRGGKVQKSIFVVVSGALILVLLPLFYLFLYLVQRDMKSSTQELRRISKMGRKSKPS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02790 257 SUPERFAMILY Expressed protein At2g23090/F21P24.15 87 116 - -
Arst3g02790 257 PANTHER ZINC FINGER PROTEIN-RELATED 27 256 - -
Arst3g02790 257 ProSitePatterns Zinc finger C2H2 type domain signature. 93 114 IPR013087 -
Arst3g02790 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 116 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02790 Arst-Chr3 41929544 41932360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02790 15 257 C2H2 Transcription Factor Family AT5G63280 60.081 8.42e-103 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst3g02790 None None None