Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02787 ATGGGTGAAAATTACGACTATATTTCTGATATCAATGCAAGAAAATTTTGTTGGAACTTTAAAGTATATGTAATCAGAATTTGGGAACATCCGAGTAAGTTCAACGAGAAGGAGATTGGAAGCATAGAGATGATCCTGCAAGATAGTAAGGGTGGAAGGGGCCATGCTTCAATACCCAAGTCTATAGTTAAGAAATGGAGTGGTGTATTTCAGGTGTTTCAGATGTATATTATAAAGAACTTTATAGTGGTGGACAACAAAACCATAAAAAAACCCACTCCATATCGCTGGATACTGACTTTTTCACACAGGACGGAGGTCAATCACGTTATGAATCCTACTTTTCCTCTTGACGCATTTGTGTTCAAGACTATACCGGAATTGCTTACGGCCGAGAAGATCGAAAACTCAGAGCTATTTGACATGATTGGTGAGGTAGTTGGAAAGCATGATCCCAGAGAGTTAGTCACCAGCAAAGGGAAGGAGACCAAACGGTTGGTTGTGGTGTTGCAAGATCTGGAAAAAAATAGGATTAACTGCACTTTATTTGGTGAAATGGTCGATGAGATACTACCACATCTGGAAGTTGGAAGGCTGGAGCCACTTATTGTAGTTATACAATACTTTAAGGCAATTAGGTGGAATGGACAAACTTCGGTCCAGAGTCATTTTGAGATCTCCAAACTCCACATCAATGCAGAGTTGAAGGATGTTGTTGGATTTAGGGACAGGTTGCTAAAGGGGGCACCATCCAATGCTTCAAGAATAAGTCAAATGTCATTCCAAAGTGGCTGGTCTGGCATGGAAGAGATTACTAATGGGTCTGCATTAGTTAAAACCATTGAAGAGGTCCTGAGTTCCAAAGAGGAGGGTCCTATTTGGGTTGCTGGAACTATTGTGGCCATAAATTGCAGCAAGAATGATTGGTATTACAAGGCCTGCAGAAGATGTCCTAAGAAAGTTGAAACACCAGTTGGTAATAAATACGAATGTGACAAATGCGGCTACACGCATGGAACTGCATCTATAAGATACAAGGTGGAGGTCATGGTCTTTGATGGAACAGGCAGCATTTCTCTCTTGCTATGGGATAGAGAAACAAGCCAATTATGTGGGAAACAAGCTGAAAAAGTTTTGGAGGAAGATGGTGGACGTGAGGATGAATACCCCCTTACCCTAGACAACATGATGGATAGGAGACTTTTATTTAAGATAAATGTGAAAGCTGCTAATATCAGTGGCTATGATCAAGTGTTCACTGTGATGAAGATATGTGACGATGAAGAAGTTGTTGACAAAAACCTACCCAAGAATTTTGATGGAAATTCATCAATGAATATGACGGAAAATGGGTGCAGTAACTCACTTGATATGTTTGGGAACATTACTGATCTTAATACTGACACTGACCCTGATGCTCAGTATACTATGGATATTAGAGAAGATTCCATAACCAGTCTCAAGTGTAAAACCCCTGCTAAAAGAGTTACAAATGGCTTTAGATCTGGCTCTAGCAGTGCAATCCAAAATGAAGATGAGGGACAACTCTCAACAAACAAGTTTAGCCGAAAGAATGCCAAGAAGCAAAAATCTATAATGATAGATGGAGAAAATTGA 1617 0.3995 MGENYDYISDINARKFCWNFKVYVIRIWEHPSKFNEKEIGSIEMILQDSKGGRGHASIPKSIVKKWSGVFQVFQMYIIKNFIVVDNKTIKKPTPYRWILTFSHRTEVNHVMNPTFPLDAFVFKTIPELLTAEKIENSELFDMIGEVVGKHDPRELVTSKGKETKRLVVVLQDLEKNRINCTLFGEMVDEILPHLEVGRLEPLIVVIQYFKAIRWNGQTSVQSHFEISKLHINAELKDVVGFRDRLLKGAPSNASRISQMSFQSGWSGMEEITNGSALVKTIEEVLSSKEEGPIWVAGTIVAINCSKNDWYYKACRRCPKKVETPVGNKYECDKCGYTHGTASIRYKVEVMVFDGTGSISLLLWDRETSQLCGKQAEKVLEEDGGREDEYPLTLDNMMDRRLLFKINVKAANISGYDQVFTVMKICDDEEVVDKNLPKNFDGNSSMNMTENGCSNSLDMFGNITDLNTDTDPDAQYTMDIREDSITSLKCKTPAKRVTNGFRSGSSSAIQNEDEGQLSTNKFSRKNAKKQKSIMIDGEN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02787 538 SUPERFAMILY Nucleic acid-binding proteins 4 112 IPR012340 -
Arst3g02787 538 Gene3D - 7 112 IPR012340 -
Arst3g02787 538 SUPERFAMILY Nucleic acid-binding proteins 132 245 IPR012340 -
Arst3g02787 538 PANTHER OS03G0429900 PROTEIN 298 423 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst3g02787 538 CDD RPA1_DBD_A_like 21 107 - -
Arst3g02787 538 CDD RPA1_DBD_B_like 141 245 - -
Arst3g02787 538 MobiDBLite consensus disorder prediction 498 538 - -
Arst3g02787 538 SUPERFAMILY Nucleic acid-binding proteins 279 426 IPR012340 -
Arst3g02787 538 Gene3D - 114 252 IPR012340 -
Arst3g02787 538 CDD RPA1_DBD_C 278 424 IPR047192 -
Arst3g02787 538 Gene3D - 262 433 IPR012340 -
Arst3g02787 538 Pfam Replication factor-A C terminal domain 296 424 IPR013955 -
Arst3g02787 538 MobiDBLite consensus disorder prediction 498 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02787 Arst-Chr3 41911219 41914413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02787 8 378 Core DNA Replication Machinery Family AT2G06510 22.564 4.83e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02787 - - ahf:112803244 634.024