Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02786 ATGGGTGAAAATTACGACTATATTTCTGATATCAATGCAAGAAAATTTTGTTGGAACTTTAAAGTATATGTAATCAGAATTTGGGAACATCCGAGTAAGTTCAACGAGAAGGAGATTGGAAGCATAGAGATGATCCTGCAAGATAGTAAGGGTGGAAGGGGCCATGCTTCAATACCCAAGTCTATAGTTAAGAAATGGAGTGGTGTATTTCAGGTGTTTCAGATGTATATTATAAAGAACTTTATAGTGGTGGACAACAAAACCATAAAAAAACCCACTCCATATCGCTGGATACTGACTTTTTCACACAGGACGGAGGTCAATCACGTTATGAATCCTACTTTTCCTCTTGACGCATTTGTGTTCAAGACTATACCGGAATTGCTTACGGCCGAGAAGATCGAAAACTCAGAGCTATTTGACATGATTGGTGAGGTAGTTGGAAAGCATGATCCCAGAGAGTTAGTCACCAGCAAAGGGAAGGAGACCAAACGGTTGGTTGTGGTGTTGCAAGATCTGGAAAAAAATAGGATTAACTGCACTTTATTTGGTGAAATGGTCGATGAGATACTACCACATCTGGAAGTTGGAAGGCTGGAGCCACTTATTGTAGTTATACAATACTTTAAGGCAATTAGGTGGAATGGACAAACTTCGGTCCAGAGTCATTTTGAGATCTCCAAACTCCACATCAATGCAGAGTTGAAGGATGTTGTTGGATTTAGGGACAGGTTGCTAAAGGGGGCACCATCCAATGCTTCAAGAATAAGTCAAATGTCATTCCAAAGTGGCTGGTCTGGCATGGAAGAGATTACTAATGGGTCTGCATTAGTTAAAACCATTGAAGAGGTCCTGAGTTCCAAAGAGGAGGGTCCTATTTGGGTTGCTGGAACTATTGTGGCCATAAATTGCAGCAAGAATGATTGGTATTACAAGGCCTGCAGAAGATGTCCTAAGAAAGTTGAAACACCAGTTGGTAATAAATACGAATGTGACAAATGCGGCTACACGCATGGAACTGCATCTATAAGATACAAGGTGGAGGTCATGGTCTTTGATGGAACAGGCAGCATTTCTCTCTTGCTATGGGATAGAGAAACAAGCCAATTATGTGGGAAACAAGCTGAAAAAGTTTTGGAGGAAGATATATGTGACGATGAAGAAGTTGTTGACAAAAACCTACCCAAGAATTTTGATGGAAATTCATCAATGAATATGACGGAAAATGGGTGCAGTAACTCACTTGATATGTTTGGGAACATTACTGATCTTAATACTGACACTGACCCTGATGCTCAGTATACTATGGATATTAGAGAAGATTCCATAACCAGTCTCAAGTGTAAAACCCCTGCTAAAAGAGTTACAAATGGCTTTAGATCTGGCTCTAGCAGTGCAATCCAAAATGAAGATGAGGGACAACTCTCAACAAACAAGTTTAGCCGAAAGAATGCCAAGAAGCAAAAATCTATAATGATAGATGGAGAAAATTGA 1494 0.3989 MGENYDYISDINARKFCWNFKVYVIRIWEHPSKFNEKEIGSIEMILQDSKGGRGHASIPKSIVKKWSGVFQVFQMYIIKNFIVVDNKTIKKPTPYRWILTFSHRTEVNHVMNPTFPLDAFVFKTIPELLTAEKIENSELFDMIGEVVGKHDPRELVTSKGKETKRLVVVLQDLEKNRINCTLFGEMVDEILPHLEVGRLEPLIVVIQYFKAIRWNGQTSVQSHFEISKLHINAELKDVVGFRDRLLKGAPSNASRISQMSFQSGWSGMEEITNGSALVKTIEEVLSSKEEGPIWVAGTIVAINCSKNDWYYKACRRCPKKVETPVGNKYECDKCGYTHGTASIRYKVEVMVFDGTGSISLLLWDRETSQLCGKQAEKVLEEDICDDEEVVDKNLPKNFDGNSSMNMTENGCSNSLDMFGNITDLNTDTDPDAQYTMDIREDSITSLKCKTPAKRVTNGFRSGSSSAIQNEDEGQLSTNKFSRKNAKKQKSIMIDGEN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02786 497 Pfam Replication factor-A C terminal domain 296 388 IPR013955 -
Arst3g02786 497 MobiDBLite consensus disorder prediction 457 481 - -
Arst3g02786 497 MobiDBLite consensus disorder prediction 457 497 - -
Arst3g02786 497 CDD RPA1_DBD_C 278 381 IPR047192 -
Arst3g02786 497 SUPERFAMILY Nucleic acid-binding proteins 4 112 IPR012340 -
Arst3g02786 497 SUPERFAMILY Nucleic acid-binding proteins 132 245 IPR012340 -
Arst3g02786 497 CDD RPA1_DBD_A_like 21 107 - -
Arst3g02786 497 Gene3D - 114 252 IPR012340 -
Arst3g02786 497 Gene3D - 262 407 IPR012340 -
Arst3g02786 497 CDD RPA1_DBD_B_like 141 245 - -
Arst3g02786 497 Gene3D - 7 112 IPR012340 -
Arst3g02786 497 SUPERFAMILY Nucleic acid-binding proteins 279 391 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02786 Arst-Chr3 41911219 41914413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02786 8 378 Core DNA Replication Machinery Family AT2G06510 22.564 4.57e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02786 - - ahf:112803244 559.681