Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02688 ATGATTCAACCTCAAACCCATTTGAATATAGCTGATAACAGTGGAGCCCGCCAATTGATGTGTATTCAAATCATAGGAGCAGGTAATCGACAATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATCAGAGCTGTAATTATACGTACTTGTAAAGAACTTAAACGTAGCATTGGCATGATAATACAGTATGATGATAATACCGCGGTTGTGATTGATCAAGAGGAAAATCCAAAAGGAACTCAAATTTTTGGCGCAATCGCCCGGGAATTGAGATAG 324 0.3827 MIQPQTHLNIADNSGARQLMCIQIIGAGNRQYASIGDIVVAVIKEAVPNMSLERSEVIRAVIIRTCKELKRSIGMIIQYDDNTAVVIDQEENPKGTQIFGAIARELR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02688 107 NCBIfam 50S ribosomal protein L14 1 107 IPR005745 GO:0003735|GO:0006412|GO:0015934
Arst3g02688 107 SUPERFAMILY Ribosomal protein L14 1 107 IPR036853 GO:0003735|GO:0005840|GO:0006412
Arst3g02688 107 SMART Ribosomal_L14_2 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst3g02688 107 Pfam Ribosomal protein L14p/L23e 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst3g02688 107 Hamap 50S ribosomal protein L14 [rplN]. 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst3g02688 107 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Arst3g02688 107 Gene3D Ribosomal protein L14 1 107 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02688 Arst-Chr3 39643230 39643553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02688 8 105 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.314 1.71e-15 65.5