Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02681 ATGATGATACCAAGTTATCGTTATTCTCATCATCATCCTATTCCTTTTGATCTCAATGAAGAACATCACCTCTTCACTACTACTACATATCCTCAACTCTCTTCTCCTTCTTCTTCTTTATCATCTTATTCTTATTGGGACCAACATCCAAACCACTTACAAATAACTCATCAACAGGCTGAGAAGATTCATGTTCCTTCTAGTGGAGGATCATGGGATCATATTCATGACCACAGAAAAAAAGAAGAAAAAGAAGAAGAAGAAGAGAAGGATGGAAACAAGAAGAGTAGTAAACTGCTCAAGTTGAAAATTTTGAAGAAAGAAGAAAGGAATGAAAATCATCATCTTGATAATCAAGCTCATCATGATGAGGAGGATCATGGTTCGGTGAAGTGGATGTCTTCAAAGATGAGAATCATGGGTGGTTCTGATACTAATAATTTCAGGTTAAGGTTTGATGAAGAGGGACCAAAGCAGCAAGCGCCGCTATCCCCTTTAGGAACTGATAATAGCAGCAGCAACAGTAGCAACAACAACTCTTCTTCAAACCGTCATGAAAATAATAATAATATGATTGTTAGGGTTTGTTCTGATTGCCACACCACAAAGACCCCTCTTTGGAGAAGTGGACCAAGAGGCCCCAAGTCTCTTTGCAATGCTTGTGGAATTAGACAAAGGAAGGCGAGGAGAGCTGCCGCGGTGGCGGCCGCGGCGGAGGTTGCAGCATCAGAGAACGATACAACTCTCATGGCTTCTACTGATGATGATGATGGTATGAAGAAGAAAGAAAAGAAGTTACACAAGCACAACAACAAAGATAAGAAGTTGAAAGCCAAGTGTAGTGCACCAAATCAGTTGAAAAAGAAGCACAAAATTGGAACCAATAACAATAATAATACTAATAAATTATCTCATAGAGGAAGAAAGAAGGTTGGTTTTGAAGACTTGACAATAAGTTTGAGCAAGAACTTGGCTTTAAATGTGTTCCCTCATGATGAGAAAGAGGCTGCAATCTTGCTCATGGCCTTATCCTATGGTTTACTTCATGGATTTCCCTCAGATCGTTACTTAGATTAA 1077 0.3918 MMIPSYRYSHHHPIPFDLNEEHHLFTTTTYPQLSSPSSSLSSYSYWDQHPNHLQITHQQAEKIHVPSSGGSWDHIHDHRKKEEKEEEEEKDGNKKSSKLLKLKILKKEERNENHHLDNQAHHDEEDHGSVKWMSSKMRIMGGSDTNNFRLRFDEEGPKQQAPLSPLGTDNSSSNSSNNNSSSNRHENNNNMIVRVCSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAAVAAAAEVAASENDTTLMASTDDDDGMKKKEKKLHKHNNKDKKLKAKCSAPNQLKKKHKIGTNNNNNTNKLSHRGRKKVGFEDLTISLSKNLALNVFPHDEKEAAILLMALSYGLLHGFPSDRYLD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02681 358 FunFam GATA transcription factor 21 190 275 - -
Arst3g02681 358 SMART GATA_3 190 241 IPR000679 GO:0006355|GO:0043565
Arst3g02681 358 MobiDBLite consensus disorder prediction 109 128 - -
Arst3g02681 358 Coils Coil 259 279 - -
Arst3g02681 358 MobiDBLite consensus disorder prediction 71 100 - -
Arst3g02681 358 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 2 350 - -
Arst3g02681 358 MobiDBLite consensus disorder prediction 156 189 - -
Arst3g02681 358 MobiDBLite consensus disorder prediction 57 100 - -
Arst3g02681 358 Pfam GATA zinc finger 196 229 IPR000679 GO:0006355|GO:0043565
Arst3g02681 358 Gene3D - 192 236 IPR013088 GO:0006355|GO:0008270
Arst3g02681 358 ProSiteProfiles GATA-type zinc finger domain profile. 194 226 IPR000679 GO:0006355|GO:0043565
Arst3g02681 358 MobiDBLite consensus disorder prediction 284 305 - -
Arst3g02681 358 MobiDBLite consensus disorder prediction 288 302 - -
Arst3g02681 358 CDD ZnF_GATA 195 227 IPR000679 GO:0006355|GO:0043565
Arst3g02681 358 ProSitePatterns GATA-type zinc finger domain. 196 221 IPR000679 GO:0006355|GO:0043565
Arst3g02681 358 MobiDBLite consensus disorder prediction 163 189 - -
Arst3g02681 358 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 193 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02681 Arst-Chr3 39278219 39280765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02681 100 350 C2C2-Gata Transcription Factor Family AT4G26150 36.260 5.53e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst3g02681 GATA 4e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02681 - - adu:107478822 587.03