Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02670 ATGGAAGATGAAAAAGCCTGCATCACAAGTCTAACTCTGGGTTTGGGAATTGGAGGAGGAGGAGGAGGGTATCCCCCAAAGAAGAAGCAGAAAATGATGATGATAATGAAGAACAAGCCTATTAAGCCTGTGCCTTCTCTGGACCTAACTTTTGGTGATGATGAAGCTTTTCCGAAAGAAGCCATTGATGATGATGATGATGATGATGATGATGATCGAGAAGAAGAGTTATTCATCTCTTTGAATAATAAGAGAGTCGGTGAAGAACACAGTTACAATAATAATAAGCACTGCCCGAATGGAAACAACAGAGATGACAGCTATAATGATGAGAATAATAATAATAATTATTGCAGCAGAAAGAAACTGAGACTCACCAAGGAGCAATCAGCTTTGCTTGAAGAAAATTTCAAGAATCATACCACTCTTAACCAAGCTCAGAAACAAGCACTTGCTAAGCAATTGAATTTAAAGCATAGACAGGTTGAAGTTTGGTTTCAGAATAGAAGAGCAAGGACAAAGCTGAAGCAAACAGAGGTGGATTGCGAGTTCTTGAAGAAATGCTGTGAGAGGTTAACCGATGAGAATCTAAGGTTGAAGAAGGAATTGCAGGAGCTACGTGCAATCAAAGCTGGACCAACACAATCACCAACACCGCCATTGTACATTCAATTACTCTCTTCTAAATCTTCACCCTTGACTATTTGTTCTTCTTGTGAGGAGCTATTGAAGAAGACCAAACAAGAAAATATATAA 756 0.3889 MEDEKACITSLTLGLGIGGGGGGYPPKKKQKMMMIMKNKPIKPVPSLDLTFGDDEAFPKEAIDDDDDDDDDDREEELFISLNNKRVGEEHSYNNNKHCPNGNNRDDSYNDENNNNNYCSRKKLRLTKEQSALLEENFKNHTTLNQAQKQALAKQLNLKHRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLTDENLRLKKELQELRAIKAGPTQSPTPPLYIQLLSSKSSPLTICSSCEELLKKTKQENI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02670 251 MobiDBLite consensus disorder prediction 43 73 - -
Arst3g02670 251 SMART halz 176 219 IPR003106 GO:0006355|GO:0043565
Arst3g02670 251 SMART HOX_1 118 180 IPR001356 GO:0003677
Arst3g02670 251 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 20 246 - -
Arst3g02670 251 ProSiteProfiles 'Homeobox' domain profile. 116 176 IPR001356 GO:0003677
Arst3g02670 251 Pfam Homeobox associated leucine zipper 176 209 IPR003106 GO:0006355|GO:0043565
Arst3g02670 251 Coils Coil 175 209 - -
Arst3g02670 251 CDD homeodomain 120 177 IPR001356 GO:0003677
Arst3g02670 251 ProSitePatterns 'Homeobox' domain signature. 151 174 IPR017970 GO:0000981|GO:0006355
Arst3g02670 251 MobiDBLite consensus disorder prediction 85 115 - -
Arst3g02670 251 MobiDBLite consensus disorder prediction 58 73 - -
Arst3g02670 251 Gene3D - 112 181 - -
Arst3g02670 251 Pfam Homeodomain 120 174 IPR001356 GO:0003677
Arst3g02670 251 SUPERFAMILY Homeodomain-like 110 177 IPR009057 -
Arst3g02670 251 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02670 Arst-Chr3 38973914 38975804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02670 109 242 Homeobox Transcription Factor Family AT4G37790 64.179 1.78e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst3g02670 Homeodomain 4.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02670 K09338 - gmx:100778922 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02762 1 89490124 89491025 Arst3g02670 3 38973914 38975804 PCT