Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02658 ATGGCAGTGGATCTGGTAGGAGTTCCACGGATGAGGATGGAACAACAAGAACAAGTTGCAATTCAAGAAGCTGCTTCAGCTGGCTTGAAGAGCATGGAGCATCTCATTCGCCTCCTCTCTTCTCAATCTCAATCTCATTCTCCTTCTACTTCCTCTTCCCCTCTCCCCAACAATAATAACAACCTCAACTGCTCCCAACTAACCGACTTCACAGTTTCCAAGTTCAAGCAAGTCATCAACCTCCTTAACCGCACTGGCCACGCCCGCTTCCGCCGCGCACCACCACAACAACAGCCTTCCCCTCCCCCTCAGGCCCAGCCTGGAACCACCACCGCCTTCACACTAGATTTCCACAAGCCCACCATTCTGAACTCCAAGCCCGCCGTCAACAAGGATGTCGACCAAGAAATGGAACTTAGTATTTCCCCTCCTGTTTCCACCACTACCTCCTCCACCTTCATGTCCTCCATCACCGGCGATGCTAGCGTCTCCGACGGCAAGATTGGCCCCTTCCTTACCCTTCCAGCTCCGCCTCCCCCTCCCGTTGCCTCCGGAAAACCTCCTCTCTCTTCTTCTCACCGGAAAAGGTGCCATGACGCAACCCTCTCCGGAAAAGCCTCCTCCTCCGCTCATTGCCATTGCTCCAAGAGAAGGAAATCACGTGTGAAACGAACGATCCGTGTGCCGGCTATAAGTTCGAAGATCGCCGATATACCGCCTGACGAATTCTCGTGGAGAAAGTACGGTCAGAAACCGATCAAGGGCTCACCTTACCCTCGTGGTTACTATAAGTGCAGCACCGTGAGAGGATGTCCGGCCAGGAAGCATGTGGAGAGAGCACAAGACGATCCGAAGATGCTAATAGTGACGTACGAAGGGGAACACCGTCACAATCCGCAGCCACACTCGCCGGAAACTGCCGGCACTCCCGCCGTCACCTCTGCTGGTGGTTTTAGCCTCCGGTCGTGTTGA 972 0.5442 MAVDLVGVPRMRMEQQEQVAIQEAASAGLKSMEHLIRLLSSQSQSHSPSTSSSPLPNNNNNLNCSQLTDFTVSKFKQVINLLNRTGHARFRRAPPQQQPSPPPQAQPGTTTAFTLDFHKPTILNSKPAVNKDVDQEMELSISPPVSTTTSSTFMSSITGDASVSDGKIGPFLTLPAPPPPPVASGKPPLSSSHRKRCHDATLSGKASSSAHCHCSKRRKSRVKRTIRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHNPQPHSPETAGTPAVTSAGGFSLRSC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02658 323 ProSiteProfiles WRKY domain profile. 234 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g02658 323 MobiDBLite consensus disorder prediction 91 111 - -
Arst3g02658 323 SMART WRKY_cls 239 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g02658 323 MobiDBLite consensus disorder prediction 175 195 - -
Arst3g02658 323 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst3g02658 323 MobiDBLite consensus disorder prediction 40 60 - -
Arst3g02658 323 FunFam WRKY transcription factor 65 223 300 - -
Arst3g02658 323 Pfam Plant zinc cluster domain 194 237 IPR018872 -
Arst3g02658 323 MobiDBLite consensus disorder prediction 295 323 - -
Arst3g02658 323 Gene3D WRKY domain 227 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g02658 323 SUPERFAMILY WRKY DNA-binding domain 237 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst3g02658 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 305 IPR044810 GO:0003700
Arst3g02658 323 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02658 Arst-Chr3 38440195 38441793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02658 1 298 WRKY Transcription Factor Family AT2G24570 51.385 4.84e-100 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst3g02658 WRKY 4.9e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02658 3 38440195 38441793 Arst3g02658 3 38440195 38441793 ECH
Arst1g02765 1 89505607 89506872 Arst3g02658 3 38440195 38441793 PCT