Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02657 ATGGCTAATCAAAAACGGGAGCACAAGATTGTGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAGAAATGATGGGAGTGGCAAATGGTACGTGTCTCGGTTTGTGGATGAGCATATTCATGAACTCGCATCTGGCAAGTTCGTTGATTACTTGAGGTCACACAGGCGGATATCTGAAGTAGAGATTGCACAAATGACTAGCTTGATGGAGGTTGGTATCAACATTCCTAAAATATATGAATCCTTCGCGGCACAGGTTGGGGGTTTTAACCTTGTGACATTCACAAAGCAAGACATGTATAATGAGGTGAGGCAACAAAGAGGAATGCAAAATGGAGAGGTAAGCGCTGCAATTCGATACTTGGAAGGTGTTTCCCGTGTAGACAACAGAATGTTTTGGAGGTACAAGGTTGGGTCTGAAAACAATCTTTGTGACCTATTTTGGAGTGATGGGCGCAGTCATTTTGACTATGCAATATTTGGAGATGTTCTTGCCTTCGATGCTAATTACGGCCGAAACAAGTACAATTTGCCTGTTGTTGTGTTCTCGGGAGTTAACCACCACAACCAAACATGTGTCTTTGGATGTGCAATGGTCTGTGCGAAACGCAAGAGTCCTACATCTGGGTTATGCAACAGTTTTTGGAATGCATGGAAAGAAAGGCCCCTAAGGCAGTCATCACAGATGGAGATACCTCGATGCGAAATGTTATACGTCATGTATTTCTTGAAACCCATCACAGGCTATGTGCTTGGCATTTGCTTCCTATTTAGACACTGCATGCTTGCGGACATAGAAGTTGACGAGTTCGAGGCGCAATGGGAGGCAATGCTGGATGAGTGTGGGGTTCGTGAAGTCGAATGGGTGAAGGATTTGTACCGCAAAAAAACCGATGGGTGGACAAAGTATACACGGGAGATATTTTGGAGATTTTGTGAAACTCTTAAAAGGTGCGTTCGAATTCACATATGCGGATGCAAAGAAAATGTTGAGGGTGAAGTATATGTTGTTCAAAAATATCACAGGCCGAAAAAGAAGTGGGAGGTTTCGAGGCAAAATGTGGGTAATAAATTCAGTTGCACCTGCCTGAGAATGGAATCATTCGGACTGCCTTGTGTCCACATACTAGCTGTGTTGGTGCGCTTGGATTATACTATCATTCCCAATATGCTTGTGCTCCGCAGATGGTCGAAGACAGCAAAGTTGCACTATGGCTTAAATTGCACTGGAAATGAAACACAGGAGCAAACAACAACATATAGGTCCCGGTTGGGAGCTTTTGCTCACCTATGCACAGACTAG 1308 0.4411 MANQKREHKIVTRCGCLAEMRIKRNDGSGKWYVSRFVDEHIHELASGKFVDYLRSHRRISEVEIAQMTSLMEVGINIPKIYESFAAQVGGFNLVTFTKQDMYNEVRQQRGMQNGEVSAAIRYLEGVSRVDNRMFWRYKVGSENNLCDLFWSDGRSHFDYAIFGDVLAFDANYGRNKYNLPVVVFSGVNHHNQTCVFGCAMVCAKRKSPTSGLCNSFWNAWKERPLRQSSQMEIPRCEMLYVMYFLKPITGYVLGICFLFRHCMLADIEVDEFEAQWEAMLDECGVREVEWVKDLYRKKTDGWTKYTREIFWRFCETLKRCVRIHICGCKENVEGEVYVVQKYHRPKKKWEVSRQNVGNKFSCTCLRMESFGLPCVHILAVLVRLDYTIIPNMLVLRRWSKTAKLHYGLNCTGNETQEQTTTYRSRLGAFAHLCTD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02657 435 Pfam SWIM zinc finger 361 382 IPR007527 GO:0008270
Arst3g02657 435 Pfam FAR1 DNA-binding domain 4 45 IPR004330 -
Arst3g02657 435 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 418 IPR031052 GO:0006355
Arst3g02657 435 SMART 26again6 360 387 IPR006564 GO:0008270
Arst3g02657 435 ProSiteProfiles Zinc finger SWIM-type profile. 347 385 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02657 Arst-Chr3 38352696 38354281 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g02657 FAR1 5.1e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02657 - - adu:107478815 918.687