Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02625 ATGGCAAAGGAAGAGGAGCAGGTACTTCCTTTGCTTATTGAGAAGTTCTCTCTCGAGGAGCAGGCATCTTTAGTTTGGCAGTTTCTTTGCAGTATTCCCGTGAACATGATGACAGAATTTCTTCCATGGCTTTCAAGATCCATATCACCTGATGAACGACTGGATTTGCAGAATTGCTTAATCAAGATAGTTCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCAAGTGGATGGAAGGGAGAAGCAGTGTTAACACAGTTGACAGTTGTGTAAAACATTCTCAAGTTCAATCTAGTAGTAGCCCATCAACTGGAAAAAGGAAATATTCTGGATCTACCCTGGATGACTCTGATGCCATTGGATCACATCCTATAGATGAAATATTGCTCTGGCATAATGCAATTAGAAAAGAGCTAAGTGAGATAGCAGTGGAGACCAGAAAGATACAATGTTCAGGGGATTTTACAAATCTATCCTCTTTTAATCAAAGATTGCAGTTCATTGCTGAAGTTTGTATATTTCATAGTATTGCTGAGGACAAAGTTATTTTTCCAGCAGTAGATGGAGAATTGTCATTTTTTCAGGAGCATGCTGAAGAAGAAAGCCAGTTTAATGACTTCCGGTGTTTGATTGAAGGTATTCAAAGTGAAGGAGCAACATCTAATTCAGAAGTTGAATTCTTTTCAAAGTTATGCTCACATGCTGATCATATAATGGAAACCATAGAGAGACATTTCCATAATGAAGAAGTTCAGGTCCTTCCACTTGCAAGAAAGCACTTTAGCTTTAAAAGGCAATGCGAACTTCTGTATCAAAGCTTGTGCATGATGCCTCTGAAATTGATTGAGCGCGTTCTTCCATGGTTGGTAGGATCATTAACTGCAGAAGAAACAAAGATGTTTCTGAGAAACATGCAGTTGGCAGCTCCAGAAATGGATTCTGCTATAGTTACACTCTTCTCTGGGTGGGCTTGCAAGGCTCGTATTGAAGGTCTATGTTTGTCTTCCGGTGCGTCAGGTTGCTGTCCTGTTCAAAGACTTTCTGATATTGAAGAAAACATTGCTTGGCCATCCTGCGCTTGTGGTTCCGCATCATCTGTAAGAGATTGTTTAGTATTAGACAAATCAGATGGGAACAGAAAGTCATTCAAGCGAAACCTATTAGAGTCCCACAACCATGGAGATATCACTGAAAATCCAGAGACTGAAAATGTCCAAAAACAATGTTTTGCTACTCGGTCTTGTTGTGTGCCAGGTTTAGGAGTAAACAGTAACAATTTGGGGTTGAGTTCTATTTCTACAGCCAAGTCCTTGCGGTCCTTGTCTTTCAACTCTTCTGCCCCATCTCTTAATTCCAGTCTTTTTGTATGGGAAACAGAAAGCAGCTCATCTGATGTTGGATCTGCACAAAGACCAATTGATACCATATTTAGTTTCCACAAAGCTATACGAAAAGACTTGGAGTATCTAGATGTTGAATCTGGAAAGCTGAGTAATGGTGATGAGATAGTTCTTCGGCAATTTAGTGGAAGATTTCGTCTTTTATGGGGCTTATATAGAGCTCATAGTAATGCAGAAGATGATATAGTATTTCCAGCATTGGAGTCAAAAGAGGCACTTCATAATGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAACAATTATTTGAGGATATTTCCTGCGTTCTTTCTGAGCTTTCTATGCTTCACGAAGCCTTGCAGATGAACCATATGCCAGAGAACTTAAGTGAAAGTAATTTTAGAACATCTGATTCCAAGGGTAGTGAGAATATTAAAAAGTATAATGAACTCGCGACTAAGCTTCAAGGAATGTGCAAATCCATAAGGGTTACTCTGGATCATCATCTTTTCAGGGAGGAGTGTGAACTGTGGCCATTATTTGGGAAACATTTCACTGTAGAAGAACAGGACAAGATAGTGGGACGGATAATTGGAACAACTGGAGCTGAAGTTCTCCAATCAATGTTGCCATGGGTAACTTCCGCACTTACTCAAGATGAACAGAACAAAATGATGGACACATGGAAGCAGGCAACTAAAAACACTATGTTCAATGAATGGCTCACTGAATGCTGGAAAGATAGTCCAGCACCTATAACACAGATAGAAACATCAGATCATAACACTTCTCGAAGAGGTGCTGAATATCAAGAAAGCTTGGACCATAATGATCAAATGTTCAAGCCTGGTTGGAAAGACATATTCCGGATGAACCAGAATGAACTTGAGTCAGAGATCCGAAAGGTTTATCGTGATTCAACTCTTGATCCAAGGAGAAAGGCATACCTTGTGCAGAATCTGATGACAAGTCGTTGGATAGCTGCTCAGCAGAAATCACTGAAAGCCATAACTGAAGTAGCATCTAATGGTGAACAAATAGAAGGGCAGTCACCATCATTTCGGAACCCTGATAAACATGTGTATGGGTGTGAGCACTATAAGAGAAATTGTAAGCTACGAGCTGCATGTTGTGGCAAGTTAGTTACTTGCAGATTTTGTCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACATCAGAAATGATGTGTATGCGCTGCCTGAATATACAGCCGATAGGGCCTAAATGCATGACACCTTCATGTAACGAACTTTCAATGGCAAAATACTATTGCAACATATGCAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAACATATGCCGTGTCGGACGAGGGCTTGGGATTGATTATTTCCATTGCATGAAATGCAATTGCTGCTTGGGCATAAGATCACAATCACATAAGTGCCTGGAAAAAGGCTTAGAAATGAATTGCCCAATTTGTTGTGATGATTTATTCACGTCAAGTGCTCCAGTTAGAGCTCTGCCTTGTGGCCATTATATGCATTCTGCTTGCTTTCAGGCATACACTTGTAGTCACTACACATGTCCGATCTGCAGCAAGTCATTGGGAGATATGGCGGTTTATTTTGGCATGCTTGACGCACTATTGGCTACTGAGGATCTTCCTGAAGAGTATAAGGACCGGTGTCAGGACATACTCTGCCATGACTGTGACAAAAAGGGCACTTCACGCTTCCATTGGTTATACCACAAATGTGGATTTTGTGGCTCTTACAATACCCGGGTGATTAAGGGTGAGGAATCAAATTCCAGCTGCTCTTACTCTTATTAG 3204 0.4042 MAKEEEQVLPLLIEKFSLEEQASLVWQFLCSIPVNMMTEFLPWLSRSISPDERLDLQNCLIKIVPEEKLLQKVIFKWMEGRSSVNTVDSCVKHSQVQSSSSPSTGKRKYSGSTLDDSDAIGSHPIDEILLWHNAIRKELSEIAVETRKIQCSGDFTNLSSFNQRLQFIAEVCIFHSIAEDKVIFPAVDGELSFFQEHAEEESQFNDFRCLIEGIQSEGATSNSEVEFFSKLCSHADHIMETIERHFHNEEVQVLPLARKHFSFKRQCELLYQSLCMMPLKLIERVLPWLVGSLTAEETKMFLRNMQLAAPEMDSAIVTLFSGWACKARIEGLCLSSGASGCCPVQRLSDIEENIAWPSCACGSASSVRDCLVLDKSDGNRKSFKRNLLESHNHGDITENPETENVQKQCFATRSCCVPGLGVNSNNLGLSSISTAKSLRSLSFNSSAPSLNSSLFVWETESSSSDVGSAQRPIDTIFSFHKAIRKDLEYLDVESGKLSNGDEIVLRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSELSMLHEALQMNHMPENLSESNFRTSDSKGSENIKKYNELATKLQGMCKSIRVTLDHHLFREECELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLTECWKDSPAPITQIETSDHNTSRRGAEYQESLDHNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKSLKAITEVASNGEQIEGQSPSFRNPDKHVYGCEHYKRNCKLRAACCGKLVTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQPIGPKCMTPSCNELSMAKYYCNICKFFDDERNVYHCPFCNICRVGRGLGIDYFHCMKCNCCLGIRSQSHKCLEKGLEMNCPICCDDLFTSSAPVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLATEDLPEEYKDRCQDILCHDCDKKGTSRFHWLYHKCGFCGSYNTRVIKGEESNSSCSYSY 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02625 1067 SMART ring_2 948 989 IPR001841 -
Arst3g02625 1067 ProSiteProfiles Zinc finger CHY-type profile. 812 881 IPR008913 GO:0008270
Arst3g02625 1067 Gene3D - 1019 1061 - -
Arst3g02625 1067 MobiDBLite consensus disorder prediction 95 110 - -
Arst3g02625 1067 MobiDBLite consensus disorder prediction 95 115 - -
Arst3g02625 1067 CDD RING-H2_Pirh2-like 947 990 - -
Arst3g02625 1067 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 515 1061 - -
Arst3g02625 1067 ProSiteProfiles Zinc finger RING-type profile. 948 990 IPR001841 -
Arst3g02625 1067 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 943 992 IPR013083 -
Arst3g02625 1067 Pfam Hemerythrin HHE cation binding domain 472 634 IPR012312 -
Arst3g02625 1067 Pfam Hemerythrin HHE cation binding domain 123 257 IPR012312 -
Arst3g02625 1067 SUPERFAMILY RING/U-box 946 993 - -
Arst3g02625 1067 CDD Hr-like 126 255 - -
Arst3g02625 1067 CDD Hr-like 474 634 - -
Arst3g02625 1067 ProSiteProfiles Zinc finger CTCHY-type profile. 884 947 IPR017921 -
Arst3g02625 1067 Pfam Zinc-ribbon 995 1052 IPR039512 -
Arst3g02625 1067 SUPERFAMILY CHY zinc finger-like 814 875 IPR037274 GO:0008270
Arst3g02625 1067 Gene3D nmb1532 protein domain like 468 699 - -
Arst3g02625 1067 FunFam Zinc finger protein-related isoform 1 943 992 - -
Arst3g02625 1067 Pfam Ring finger domain 947 989 IPR001841 -
Arst3g02625 1067 SUPERFAMILY Zinc hairpin stack 885 941 IPR037275 -
Arst3g02625 1067 Gene3D nmb1532 protein domain like 126 273 - -
Arst3g02625 1067 Pfam CHY zinc finger 819 894 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02625 Arst-Chr3 37176778 37183741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02625 461 686 C2H2 Transcription Factor Family AT3G18290 27.876 1.65e-20 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02625 K16276 - gmx:100801725 1894.78