Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02609 ATGATGTCTAGTTCAAAGAGTGTCAGTAGCAGTGGTAGTGAGGATGACAATGAAATTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATCTTCTCACACAATCCATTGCTAACCAAGGCGAAGGACGTTGGAATTTACTTGCTAAATGTTCAGGATTAAAGAGAACAGGAAAAAGCTGCAGATTAAGGTGGCTGAATTATCTAAAGCCGGATGTAAAGAGAGGAAATTTAACACCACAGGAGCAGCTTTTGATTCTTGAACTTCACTCAAAGTGGGGGAACAGGTGGTCAAAGATTGCACAGCATTTACCGGGCAGGACAGACAATGAAATCAAGAACTACTGGAGAACCAAGATTCAGAAACAAGCAAGGCATTTGAAAATCGACACCGATAGCAGAGAGTTTCAAGAACTAGTGAGGCGTTTTTGGATTCCAAGATTGCTTCAGAAAGCAAGAGAATCATCCTCTTCTTCAGCCATGCCAATCCAAAACCAAGCAACTATGCCTGTTTCTCAGTATTCACCAGCAGCAACAACACCACCACCTTGTGTGCACCCAACATGTCCAAATTATTTGGATCAACGACTTGAGCAACACAGCAATGGTTCATGCGTATCCTTCTCTGAACCAAAATTGCCTCAGTTATTGGGATACAACTCCAACAATTTTGGTAATGGCTTGGATACCGATGAATTTGGGACCTTCACATATGATTATGGCTACCATGTAAATAGCAATGGCTATGACAATGAGACCCTCAACATGGAATACCCTGTTGATGATTGCCAAATGGCAAGACACAATTGGGTGAATGATTTTGCATGTGACTTGTGGAACATGGATGAATGCTGCCAATTTAGTAACTTTAAAAAATAA 876 0.4132 MMSSSKSVSSSGSEDDNEIRRGPWTLEEDNLLTQSIANQGEGRWNLLAKCSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTKIQKQARHLKIDTDSREFQELVRRFWIPRLLQKARESSSSSAMPIQNQATMPVSQYSPAATTPPPCVHPTCPNYLDQRLEQHSNGSCVSFSEPKLPQLLGYNSNNFGNGLDTDEFGTFTYDYGYHVNSNGYDNETLNMEYPVDDCQMARHNWVNDFACDLWNMDECCQFSNFKK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02609 291 Gene3D - 21 73 - -
Arst3g02609 291 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Arst3g02609 291 MobiDBLite consensus disorder prediction 1 20 - -
Arst3g02609 291 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Arst3g02609 291 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 183 IPR044676 GO:0003700|GO:0006355|GO:0043565
Arst3g02609 291 CDD SANT 78 117 IPR001005 -
Arst3g02609 291 Gene3D - 77 120 - -
Arst3g02609 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Arst3g02609 291 CDD SANT 23 68 IPR001005 -
Arst3g02609 291 FunFam MYB transcription factor 77 119 - -
Arst3g02609 291 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Arst3g02609 291 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Arst3g02609 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Arst3g02609 291 FunFam Myb transcription factor 21 73 - -
Arst3g02609 291 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Arst3g02609 291 SMART sant 73 121 IPR001005 -
Arst3g02609 291 SMART sant 20 70 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02609 Arst-Chr3 36962347 36963665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02609 16 286 MYB Transcription Factor Family AT1G68320 47.842 1.86e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst3g02609 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02609 K09422 - gmx:778045 393.275