Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02588 ATGAGATTAAGCTGCAACGGTTGCCGAGTGCTGCGAAAGGGATGCAGCGGGGAATGCCCGATCAGGCCATGCCTTCAGTGGATAAAGTCGCCGCAGTCGCAGGCCAACGCCACCCTCTTCCTGGCCAAATTCTACGGCCGAGCCGGCCTCATCAACCTCATCCATGCGGCCGCACCGCATCTACGACCAGCGGCGTTTAAGTCGCTGCTCCACGAAGCGTGCGGGAGGATCGTGGAGCCCATTCTTGGGTGCACGGGGTTGCTGTCGTCGGGGCGGTGGGACCTTTGCGAGGCGGCCGTGGAGGCCGTTTTGAGTGGGGCCCCAGTCGGGAAGGTGTCGTTGTGGTGCGAGTCTGCGGGTTCTTCGATGCTGAAGGCGTGCGATATAAGACACGTGGCGAATAAGGGAATGAAGAGTGGGTTGCACAAGGTGAAGGAGAGCAGTAAGGGTTTCAAACGGAACGGAGGAGGAAAAGGGAAGAGAGGGAAGGAGATTGCTGACGTCAGCGACGACGACTGGGCTTCCGGACTGAGTGACCATAGAAGTTTAGTTAACGGTAACGGTGATAGCTGCTCCGTGGAAACCGAGACGGACACGGTGGAGGCTGCAGAAGCGTGTGACGGAGGCTTGGACCTCAACTTGACTTTGGGGTGTTTCTCGTCTTAA 666 0.5841 MRLSCNGCRVLRKGCSGECPIRPCLQWIKSPQSQANATLFLAKFYGRAGLINLIHAAAPHLRPAAFKSLLHEACGRIVEPILGCTGLLSSGRWDLCEAAVEAVLSGAPVGKVSLWCESAGSSMLKACDIRHVANKGMKSGLHKVKESSKGFKRNGGGKGKRGKEIADVSDDDWASGLSDHRSLVNGNGDSCSVETETDTVEAAEACDGGLDLNLTLGCFSS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02588 221 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Arst3g02588 221 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Arst3g02588 221 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 195 - -
Arst3g02588 221 MobiDBLite consensus disorder prediction 145 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02588 Arst-Chr3 36436613 36437705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02588 1 216 AS2 family AT3G02550 46.552 3.67e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst3g02588 LOB 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02588 - - pcin:129288305 226.483