Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02586 ATGAGCATAGACATGAAAGAAGCAGCTGCAACTGCAACAACTGCAAGTGCCTTGGGTGCCAAGACGGCCAGGGCTTGCGACAGCTGCTTACGGAGGAGGGCACGGTGGTTCTGCGCTGCAGATGATGCATTCCTCTGCCATGCCTGCGACAACTTGGTCCACTCCGCGAACCAGTTAGCGAGTAGGCACGAGAGGGTTAGGCTTCAAACGGCGTCGTGCAAGCTCACCAACAAGGTAACCACCGCACACGCATGGCACAGTGGGTTCACGCGCAAGGCAAGAACACCACGCCACAACAACAACAAGCACTTAGCCTTACAACAAAGGCTTAAGGACCAAGTTTTATTCAACACCGCTTGTGTTCTTCCCGTTGTGCCGGAGCTTGGAGTTGAAGAAACAGCTCTTCTGGATGATCATGAGAGTGAGGAGCAGCTGCTGTGTCGCGTGCCCGTGTTTGACCCTTTCGATGCAGAGCTTTGCAATGATGTGTACGGTGAAGTCAGGGACGAGAAGAATCACGAAGAACGAGGTTGTTGTGATGACTTGGAGAGCTTCTCTGAGTTTCTGCCATCGGATATGGATCTTGCTGAGTTTGCTGCTGATGTTGAAACCCTGCTTGGAAGTGGGATTGATGAAGATTCATTAGGAATTGATTGCAAAGAAGAAGTTCAAAGAGAAGATGCATGCGTTAGAGCCGAAACCACCATTAATATTAAGGAGGGTGCAATGGTAATGGTAAAGGTGAAGGATGAGGAGCTTGATTCAGATACAGCAAGTCATCTTCAGTCAGTTTTTGACATCACAAACGATGACGAATTTGATTGGAATATCGAATCGGTGCTCTTATCGGCGGAGGAAAAGGCGACCACTGCCGCACCAGTAAGTAATAATAGTGATAGTGTTGGTGAAGAGAAAAAGAGGGACATATTTTTGAGACTAAACTATGAAGAGGTTATAAATGCTTGGGCAAGCCAAGGTTCTCCGTGGACAACAGGAACCCCTCCTCCGTTCAACCCTCATGATCATTCCTGGCTAAATTTCTTGGATCCAAGTGGTGGAGATGTTCATCAGTGCTCTTCTTATGGGGATGGCAGAAGCGTGAGGGGACATGTTGGAGATGGGGGAAGAGAAGCAAGAGTATCTAGGTACAGAGAGAAGAGAAGGACTCGTTTGTTTGCTAAGAAGATAAGATATGAAGTGAGGAAACTGAATGCGGAGAAGAGACCTAGAATGAAAGGTAGATTTGTCAAGAGATCATGCCTTGTTGGAGGAGCCACATCTTCCTTTCAACCCTCCTATAACTGA 1305 0.4774 MSIDMKEAAATATTASALGAKTARACDSCLRRRARWFCAADDAFLCHACDNLVHSANQLASRHERVRLQTASCKLTNKVTTAHAWHSGFTRKARTPRHNNNKHLALQQRLKDQVLFNTACVLPVVPELGVEETALLDDHESEEQLLCRVPVFDPFDAELCNDVYGEVRDEKNHEERGCCDDLESFSEFLPSDMDLAEFAADVETLLGSGIDEDSLGIDCKEEVQREDACVRAETTINIKEGAMVMVKVKDEELDSDTASHLQSVFDITNDDEFDWNIESVLLSAEEKATTAAPVSNNSDSVGEEKKRDIFLRLNYEEVINAWASQGSPWTTGTPPPFNPHDHSWLNFLDPSGGDVHQCSSYGDGRSVRGHVGDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRSCLVGGATSSFQPSYN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02586 434 Pfam B-box zinc finger 23 66 IPR000315 GO:0008270
Arst3g02586 434 Pfam CCT motif 376 418 IPR010402 GO:0005515
Arst3g02586 434 SMART bboxneu5 21 68 IPR000315 GO:0008270
Arst3g02586 434 CDD Bbox1_BBX-like 25 68 - -
Arst3g02586 434 ProSiteProfiles Zinc finger B-box type profile. 21 68 IPR000315 GO:0008270
Arst3g02586 434 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 15 419 - -
Arst3g02586 434 ProSiteProfiles CCT domain profile. 376 418 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02586 Arst-Chr3 36246573 36248421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02586 13 418 C2C2-CO-like Transcription Factor Family AT1G25440 44.860 5.39e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Arst3g02586 zf-B_box 2e-06 No_clan