Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02560 ATGGCTGAAACTAAGTCAACTGGTAAGACAACTAAGAAACAAGATTCAAAAAAAGCTTCCAATGTTGGAAATCCGCCTTTCAGGAAGCAAAATCGGAAGGCTGAAAACCCCATGCGGATCTTTCCTAATCCTGACCAGACTTCTGAATCTGGACATTCTAACTCTTGGATCTGCAAAAATGCTGCCTGTAGGGCTGTTCTATCTATAGATGACACATTTTGTAGACGGTGTTCTTGTTGTATTTGTCACCTTTTTGATGATAACAAAGATCCTAGTCTTTGGTTGGTATGCTTGTCTGAATCTACTCAAGGGGACTATTGTGGATTGTCTTGCCATATCGAGTGTGCTCTCAAACATGAAAAAGTAGGAGTTGTTGATCATGGGCAACTGATGCAACTAGATGGTGGCTATTGTTGTGCATCATGTGGCAAAGTTACTGGGATACTTGAATGCTGGAAGAAACAGCTAACTATTGCAAAGGATGCTAGACGTGTAGATGCACTCTGTCACAGGATATATTTGAGCTACAGGCTCTTGGATGGGACTTTGAAATTTAGAGAGTTGCATGAACTGGTACAAAAGGCGAAGGCTAAACTGGAGACAGAAGTTGGTCCAGTTAATGGGGTTTCTGCCAAGATGGCACGAGGCATTGTCAGCAGACTCCCTATAGCTGGTGATGTGCAGAAATTCTGCACTCTTGCTATTGAGAAAGCTGACAGATGGCTGGCTAGTGTTCCAAATGTGAATCCTGATTCCAGAGAGGGTTCACTTCCTGCTGCTTGCAAGTTTGTTTTTGAAGAGGTAACAGCTTCCTCTGTCAAAATCATTTTACTTGAAGTATCAAATGTGGCGGCTGAGAACAGTAAGGGATACAAGCTTTGGTATTACAAGAGTAGGGAAGAATCACACACCAAAGATCCTGTTTCTGTGATTCCTAGATCACAGAGGAGGGTTTTGATATCCAACCTTCAGCCTTGTACAGAATATACTTTTCGCATTGTATCATATACGGATTCAGGAGACCTGGGTCATTCTGAGGCTAAATGTTTCACGAAGAGCATCGAGATAATTCAAAACGTTCCTCCATCTGTTGCTATGGTACGAAAGAGAGAGAATTTTCAAATTGGGGCTTGTTCTTCTGGCTCGAAGATTGAGCCCAATCGCACTATGAAAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAATTTTGCATCTAGCTTGGGCTCAGGAACAAGGTTATCTTGAAGATATTTGCTGTGCTGATATGAAAACGTGCTGTGGACAAAGTGAAATGGTCAAGCCTAAAACTCCAGAAGAGCAGTTGCCTTCAGTTCCACGAGGCCTTGATTTAAATGTTGTTTCAGTTCCAGATTTAAATGAAGAACTAACACCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGTTGCACTTTGATGCAGGCTGTTGAGGCAGATGATGATGCTGCCTCTCATGATCTTGAGAAGAATGGTTTAGCAAGATCCCATGGGAGTGGTGATTCCCAAACCTGGACCCATCGCCCAACAGGGGAAGTGCCAGCTGTCGACTCTCGCATAGACGTGACTAGAAAAAGGATAGCAAGCACGAATGAAGAGATACATGATTGTGACAGTACTTTGATAAATGGTTCTCCTGTACGCATATCTGATGGTTCATCTTCCCTGGATGAGAACTTTGAGTATTGCGTGAAAGTAATTCGTTGGCTAGAATGTGAGGGTCACATAAAACAGGAATTTAGGTTGAAATTGCTAACATGGTTTAGTCTGAGGTCAACAGACCAAGAACGCAGGGTGGTTAACACCTTCGTTCAAACTCTCATTGATGATCCAAGCAGTTTGGCAGGGCAACTTGTTGACTCTTTTTATGACATTATATCCAACAAGAGGCCAAGAACTGGATTCTGTAATAAAGCTTTGGCATCAAACTAA 1950 0.4241 MAETKSTGKTTKKQDSKKASNVGNPPFRKQNRKAENPMRIFPNPDQTSESGHSNSWICKNAACRAVLSIDDTFCRRCSCCICHLFDDNKDPSLWLVCLSESTQGDYCGLSCHIECALKHEKVGVVDHGQLMQLDGGYCCASCGKVTGILECWKKQLTIAKDARRVDALCHRIYLSYRLLDGTLKFRELHELVQKAKAKLETEVGPVNGVSAKMARGIVSRLPIAGDVQKFCTLAIEKADRWLASVPNVNPDSREGSLPAACKFVFEEVTASSVKIILLEVSNVAAENSKGYKLWYYKSREESHTKDPVSVIPRSQRRVLISNLQPCTEYTFRIVSYTDSGDLGHSEAKCFTKSIEIIQNVPPSVAMVRKRENFQIGACSSGSKIEPNRTMKDSGFKVRDLGKILHLAWAQEQGYLEDICCADMKTCCGQSEMVKPKTPEEQLPSVPRGLDLNVVSVPDLNEELTPPFESSRDEDNGCTLMQAVEADDDAASHDLEKNGLARSHGSGDSQTWTHRPTGEVPAVDSRIDVTRKRIASTNEEIHDCDSTLINGSPVRISDGSSSLDENFEYCVKVIRWLECEGHIKQEFRLKLLTWFSLRSTDQERRVVNTFVQTLIDDPSSLAGQLVDSFYDIISNKRPRTGFCNKALASN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02560 649 MobiDBLite consensus disorder prediction 497 519 - -
Arst3g02560 649 Pfam Fibronectin type III domain 263 343 IPR003961 GO:0005515
Arst3g02560 649 MobiDBLite consensus disorder prediction 1 52 - -
Arst3g02560 649 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Arst3g02560 649 MobiDBLite consensus disorder prediction 1 16 - -
Arst3g02560 649 Gene3D Immunoglobulins 244 347 IPR013783 -
Arst3g02560 649 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Arst3g02560 649 CDD PHD_VIN3_plant 78 142 - -
Arst3g02560 649 PANTHER VIN3-LIKE PROTEIN 2-RELATED 6 644 IPR044514 GO:0010048|GO:0040029
Arst3g02560 649 CDD FN3 262 341 IPR003961 GO:0005515
Arst3g02560 649 SUPERFAMILY Fibronectin type III 265 346 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02560 Arst-Chr3 35264597 35270806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02560 54 640 PHD Gene Family AT3G24440 49.667 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02560 - - gmx:100780157 1096.65