Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02550 ATGAAGAAGGAAAATCAAAACGTTTCCGTTGTAGCTGTTCTCACTGCATTGTTGTTTGCAGGCACATTGTCATCAGTGTGTGCCTCCCACTCCAAGCAAACAAGCTTCAGTGGCGAACTCAGCCATGTGGAAACCATGTATATCAAGCAGCGGCAGTTGCTCTACTACAGGGACGAGTTCGGTGACAGAGGAGAGAATGTCACCGTAGACCCTTCCCTGGTGTTTGAGAACCAGCGCATCAGAAACGCTTACATTGCATTGCAAGCATGGAAGCAAGCCATTGTTTCCGATCCTCTCAACTTCACAGCAAACTGGGTAGGATCTGATGTGTGCAGCTACACTGGGGTCTACTGTGCACCCGCACTGGACAACCCTAAGATCCGCACCGTTGCTGGCATTGATCTGAACCATGCGGATATTGCTGGCTACTTACCGGAAGAGCTTGGTCTCTTGGTGGATCTTGCCCTCTTCCACATTAACTCAAACAGGTTCTGTGGCACATTACCGCACCGCTTCGATAAGCTCAAGCTCTTGTTCGAATTGGATCTCAGTAACAACCGCTTCGCCGGCAAGTTCCCTGCTGTGGTACTGAGACTCCCAACCCTCAAGTTCTTGGATCTGAGGTTCAACGAGTTCGAAGGTGGGGTCCCCAGAGAGCTCTTTGACAAAGATCTTGACGCCATTTTCATCAATCACAACAGGTTCGTCTTTGAAATTCCTGATAACTTAGGAAACTCGCCGGTTTCCGTTATTGTGTTGGCCAACAACAGGTTCCATGGTTGCATCCCTGCAAGCATCGGGAACATGTCGAACCTCAACGAGATCATTCTCATGAACAATGAGCTCAGAGCGTGCTTGCCTTCCGAGATTGGCTTGTTGAAGAACCTCACAGTCTTTGATATCAGCTTCAACCAGCTCTTGGGACCATTGCCGGACGCCATTGGAGGAGCTGTGAGCTTGGAGCAGTTAGACGTAGCGCACAACTTGCTCTCTGGGAACATTCCGGCCAGTATTTGCATGCTGCCAAATCTTCAGAACTTCACTTATTCTTATAACTTCTTCACAGGGGAGCCGCCGGCGTGCCTGAGGCTGGCATCGTTTGATGACCGGACGAACTGCTTGCCGGGAAGGCCGTTGCAGAGATCCGCGGCCCAATGTAGGTCGTTCTTGTCTAAACCTGTGGACTGTAACTCGTTTGGATGCAAGCCATTTGTTCCTTCCCCTTCACATCCTTCGCCTCCTTCACCTGCTTCGCCTCCTTCACCTTCTTCACCTTCTTCACCTTCACCCTCACCCTCTTCACCGCCTTCTATTCCTTCACCTTCTCTGCCTTCTCCCTCTTCGCCACCGTCTCCCCCTTCGCCTTCTTCCCCCAATGCACCAGGACAAGGTCCTCCTCCATCAACTCCTACTCCAATACCTTCTCCACCTAGAAGCGAACCTTCCCCAATTTATAGACCACCCTCTCCTCCCTCCTCACCACCCCCGCCATCACCAATCTATATACCACCTTCTCCCACGCAGCCAGCACCTCCATCTGAGCCTTCACCTACCCCAACCCCAACGCCACCATACTGTGTCCGGTCGCCACCGCCTCCGCCTCCGCCGCCAAATTCTCCATCAATACCGGCTCCTGAATTATCCCCGCCCCCACCTTCGCCTTATCATTATACCTCGCCGCCACCTCCCACTCACTCACCTCCGCCACCCACATATAACCAATCACCGCCACCTCCACCACCCTGCATAGAACCTCCTCCACCGCCACCACCTTCTCCCACACCTTATCTCCCACCACCATCCCCATCACCTCCACCTCCACCGGTTCAACATAATTCCCCGCGACCACATCATCCACCGGTCCACTATAGTTCACCACCACCGCCACCGGCACAATATAGTTCACCACCACCGCCACCGGCACAATATAGTTCTCCACCACCCCCTGTCCATTACAGTTCACCACCACCACCAACCCCTGTTCATTATAGTTCTCCGCCGCCACCAGCATCATCACCACCCTGCGAAGAAACTCCACCATCCCCGACCCCTTCCCCACCACCATCCCCTGTATATGAAGGGCCATTGCCACCTGTCGTCGGAGTCCCATACTCATCGCCTCCACCACCACCTTTCTATTAA 2142 0.5322 MKKENQNVSVVAVLTALLFAGTLSSVCASHSKQTSFSGELSHVETMYIKQRQLLYYRDEFGDRGENVTVDPSLVFENQRIRNAYIALQAWKQAIVSDPLNFTANWVGSDVCSYTGVYCAPALDNPKIRTVAGIDLNHADIAGYLPEELGLLVDLALFHINSNRFCGTLPHRFDKLKLLFELDLSNNRFAGKFPAVVLRLPTLKFLDLRFNEFEGGVPRELFDKDLDAIFINHNRFVFEIPDNLGNSPVSVIVLANNRFHGCIPASIGNMSNLNEIILMNNELRACLPSEIGLLKNLTVFDISFNQLLGPLPDAIGGAVSLEQLDVAHNLLSGNIPASICMLPNLQNFTYSYNFFTGEPPACLRLASFDDRTNCLPGRPLQRSAAQCRSFLSKPVDCNSFGCKPFVPSPSHPSPPSPASPPSPSSPSSPSPSPSSPPSIPSPSLPSPSSPPSPPSPSSPNAPGQGPPPSTPTPIPSPPRSEPSPIYRPPSPPSSPPPPSPIYIPPSPTQPAPPSEPSPTPTPTPPYCVRSPPPPPPPPNSPSIPAPELSPPPPSPYHYTSPPPPTHSPPPPTYNQSPPPPPPCIEPPPPPPPSPTPYLPPPSPSPPPPPVQHNSPRPHHPPVHYSSPPPPPAQYSSPPPPPAQYSSPPPPVHYSSPPPPTPVHYSSPPPPASSPPCEETPPSPTPSPPPSPVYEGPLPPVVGVPYSSPPPPPFY 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02550 713 PRINTS Proline rich extensin signature 437 458 - -
Arst3g02550 713 PRINTS Proline rich extensin signature 423 435 - -
Arst3g02550 713 PRINTS Proline rich extensin signature 403 419 - -
Arst3g02550 713 PRINTS Proline rich extensin signature 461 477 - -
Arst3g02550 713 Gene3D Ribonuclease Inhibitor 83 248 IPR032675 -
Arst3g02550 713 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 21 579 - -
Arst3g02550 713 FunFam Leucine-rich repeat extensin-like protein 1 84 245 - -
Arst3g02550 713 FunFam Leucine-rich repeat extensin-like protein 5 246 385 - -
Arst3g02550 713 SUPERFAMILY L domain-like 83 364 - -
Arst3g02550 713 Gene3D Ribonuclease Inhibitor 249 389 IPR032675 -
Arst3g02550 713 MobiDBLite consensus disorder prediction 407 713 - -
Arst3g02550 713 Pfam Leucine rich repeat N-terminal domain 86 118 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02550 Arst-Chr3 34906556 34909537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02550 2 401 Trihelix Transcription Factor Family AT4G18670 73.815 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02550 - - qsa:O6P43_007947 652.514