Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02519 ATGCCTTCTCTGTCTATCTTCCCGTCACTGCCATCGCTTCAAAACCCTAACTTGGAGCATGCCCACCTCTTCAAATCCATCGGAACCCTAAATTTCAGTTTAACTTCACGAACAGAGTGTCACTGCCACTTCTCGCACCACTTCAAAGCCACTCTCTCTCTTCTCTCTAGGGTACAGAACCATAGAATCCCGTCCCGGAGGATACACTGCAAAGTCTTGAAGGATCCTGGGGAAGAGGTTAAGGTGGTTTTGGACTCCGACGGCGGAGGTGGCGGCGGCGGCGACGACGATGGCGATGGTGGGGATAAGAGAGAGGTTAAGAAGAAAGAAGGGTCTTCGGGGCCCTTGCCAGAATGGTTGAATTTCAATTCCGATGACGCAAAGACGGTGTTCGCGGCTCTGGCTATATCGCTTGCGTTTCGTGCGTTCGTGGCTGAGCCGAGGTACATTCCTTCGCTGTCAATGTATCCTACCTTTGATGTTGGAGATCGAATTGTTGCTGAAAAGGTTTCATACTACTTTAGAAAGCCATGTGCAAATGACATAGTGATATTCAAAAGTCCTCCAGTCCTTCAAGAAGTTGGATATACTGATGATGATGTTTTCATAAAACGGATTATTGCAAAGGGAGGTGATATTGTGGAGGTTCGCAAAGGTCGTCTCATAGTTAACGGGGTTGAGAGGAGTGAAAAGTTCATCCTTGAACCACCTTCTTATGAGATGAAGCCCACGCGTGTTCCGGAAAACTACGTCTTTGTGATGGGGGACAACCGCAATAATAGCTATGATTCCCATGTGTGGGGTCCGTTGCCAGCCAAGAATATCATCGGAAGATCAGTGTTCCGATACTGGCCTCCAAATAGAATAGCCGGCACTGTTTCGGAGGATACATGTCCCGTTGAAACCAAGCAGGACACAACTACTCTAGTTTCTTCTCAATGA 942 0.4788 MPSLSIFPSLPSLQNPNLEHAHLFKSIGTLNFSLTSRTECHCHFSHHFKATLSLLSRVQNHRIPSRRIHCKVLKDPGEEVKVVLDSDGGGGGGGDDDGDGGDKREVKKKEGSSGPLPEWLNFNSDDAKTVFAALAISLAFRAFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDDDVFIKRIIAKGGDIVEVRKGRLIVNGVERSEKFILEPPSYEMKPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIAGTVSEDTCPVETKQDTTTLVSSQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02519 313 ProSitePatterns Signal peptidases I signature 3. 251 264 IPR019758 GO:0004252|GO:0016020
Arst3g02519 313 PANTHER SIGNAL PEPTIDASE I 114 290 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst3g02519 313 FunFam Peptidase/ serine-type peptidase 152 283 - -
Arst3g02519 313 Gene3D Umud Fragment, subunit A 140 298 - -
Arst3g02519 313 CDD S26_SPase_I 146 278 IPR019533 GO:0004252|GO:0006465
Arst3g02519 313 MobiDBLite consensus disorder prediction 83 113 - -
Arst3g02519 313 ProSitePatterns Signal peptidases I lysine active site. 204 216 IPR019757 GO:0008236|GO:0016020
Arst3g02519 313 SUPERFAMILY LexA/Signal peptidase 141 290 IPR036286 -
Arst3g02519 313 PRINTS Bacterial leader peptidase 1 (S26A) family signature 143 159 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst3g02519 313 PRINTS Bacterial leader peptidase 1 (S26A) family signature 246 265 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst3g02519 313 PRINTS Bacterial leader peptidase 1 (S26A) family signature 202 214 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst3g02519 313 ProSitePatterns Signal peptidases I serine active site. 152 159 IPR019756 GO:0004252|GO:0016020
Arst3g02519 313 MobiDBLite consensus disorder prediction 96 112 - -
Arst3g02519 313 NCBIfam signal peptidase I 128 286 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst3g02519 313 Pfam Signal peptidase, peptidase S26 127 284 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02519 Arst-Chr3 34303577 34306142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02519 155 285 MADS-box Gene Family AT1G29960 31.579 1.01e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02519 K03100 - qsa:O6P43_004025 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02519 3 34303577 34306142 Arst3g02519 3 34303577 34306142 ECH