Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02501 ATGTCTGCAGAAAAGGGGTATGTAGGGTTGGGAGAGGTTGGTGAAATGGAAGAAAGCATTGGGTTGAACCTGAAAGCAACTGAGTTGAGGCTTGGGTTGCCAGGGTCAGAGTCACCGGTGAAGAGTACTAGTTTGGGGGCAAAGAGGGGTTTCTCGGACGCCAATGATGGCAAGTGGGTTCTTTCTGGGAATGGAAAAGCTGGATCTGACTTGGCTTTGGGCAAAGATGCTTCCTTGTTCTCTCCTCCCTCTGACAATACCAACAATGACCCTCTTCCACTTCCACAACCTTCAAAGCCTATTCCTGCTCCTGCTGCAAAGGCACAAGTTGTTGGATGGCCACCAATCCGTTCATTCAGGAAGAACTCAATGGCAACTCAGCCTCCTCAAAAGAATGAAGCTGATGCAGAACCCAAGCCTGGTTGCCTTTATGTCAAAGTCAGCATGGATGGCGCCCCATACTTGAGGAAAATGGATCTCAACAATTATGCTTCCTATAGGGACCTCTCTTCAGCACTCGAAAAGATGTTTAGTTGTTTTACTCTCGGTCAATGCGGCTCTCATGGGGTTTCTAGCCGAGATAATTCAAGCGAAAGCAAATTGAGGGATCTCCTCCACGGCTCGGAATACGTGCTCACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGACTCTTGCAAGAGGTTGAGGATAATGAAGAGTTCCGAAGCAATTGGGTTAGCACCTAGAGCCATGGAAAAGTGCAGAAGTCGCAATTAG 789 0.4791 MSAEKGYVGLGEVGEMEESIGLNLKATELRLGLPGSESPVKSTSLGAKRGFSDANDGKWVLSGNGKAGSDLALGKDASLFSPPSDNTNNDPLPLPQPSKPIPAPAAKAQVVGWPPIRSFRKNSMATQPPQKNEADAEPKPGCLYVKVSMDGAPYLRKMDLNNYASYRDLSSALEKMFSCFTLGQCGSHGVSSRDNSSESKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCRSRN 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02501 262 Pfam AUX/IAA family 27 253 IPR033389 -
Arst3g02501 262 FunFam Auxin-responsive protein 137 254 - -
Arst3g02501 262 SUPERFAMILY CAD & PB1 domains 138 243 - -
Arst3g02501 262 MobiDBLite consensus disorder prediction 32 107 - -
Arst3g02501 262 Gene3D - 137 255 - -
Arst3g02501 262 ProSiteProfiles PB1 domain profile. 142 244 IPR000270 GO:0005515
Arst3g02501 262 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 22 249 IPR003311 GO:0005634|GO:0006355
Arst3g02501 262 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02501 Arst-Chr3 34000817 34003016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02501 85 247 B3 DNA Binding Superfamily AT3G61830 30.488 2.40e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst3g02501 AUX_IAA 2.6e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02501 K14484 - gmx:100803754 343.969