Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02499 ATGATGGATGTTGCTGAGCTTGAAGAAAATCTTTTTGCAGCAAGTGATGCCAAGTTACATGGAGAAATGTGCAGGACTCTTTCTGCAATATATTGTAAAATATTGACAATATTTCCTTCTCTAGAAGCAGCTAAGCCTAGGAGCAAATCTGGAATACAGGCATTATGTTCACTGCATGTAGCTTTAGAGAAGTCGAAGAATGTTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACCTGGCGATAACTGGCGACGCCGTACTTCAAAAATTTGAAAAGGCTAAGTCTGCACTTGTTGACAGTCTTAAACTGGTGGAAGATATTGTTCCTCAATCTATTGGGTGTCAGGTTGAGAAAATTGTGGAAGAACTTGCAAGTACGGTTTTTGCAATTGACCCCTTAGAAAAACAAGTTGGCGACGATTTAATTGCATTGCTTCAGCAGGGAAGGAAGCTTGACAACTCTAATGACAGTAGTGAACTTGAATGTTTTCATCAGGCTGCTACTAGACTTGGAATTACATCTTCAAGAGCAGCTCTTACTGAACGAAGAGCTCTCAAAAAACTCATTGAAAGGGCTCAGGCTGAGGAAGACAAGCGGAAGGAATCAATTATTGCATATCTTTTACACCTCATGAGGAAATATTCTAAGTTGTTTAGAAGTGAATTCTCAGATGATAATGATTCTCAGGGCTCCCAACCCTGTTCACCTACTGTTAATGGATATGTTGAGGATGGTGTTCAGACTCAAGCGTTTGATAGAGTATTTTCAAAACTTAGTTCCATTAACTTAAAGCCGAATAATAGAAAATCAGGCCAGATGCCCCTTCCCCCTGAAGAGTTGAGGTGTCCGATATCTCTGCAACTCATGAGTGATCCTGTTATAATTGCTTCAGGTCAAACATACGAAAGGGCTTGTATAGAAAAATGGTTCAGTGATGGGCATAACACCTGCCCAAAGACTCAACAGAAACTTCCACATCTTTTATTGACTCCTAATTACAATGTCAAGAATCTTGTGGCTAGTTGGTGTGCACAGAATGGAATTCCTATTCCTGAAGGCCCTCCCGAATCTCTTGATTTTAACTATTGGAGATTGGCTTTATCAGATACCGATTCCACAAATTCAAAATCTGTTAACAGTGTAAATTCTTGCAAGTTGAAAGGTGCAAAAGTGGTTCCAGTAGAAGAGAGCGGCATGTCAGAGCAAACCGGGGTAGCTGGAGCTGAAAGTGTGTCTACACAAGAGGACGATAATGAACAGTATCTTAGTTTTCTGAAAGTCTTAACAGAAGGGAACGACTTACAGGGGAAGTGTAAGGTTGTACAAAGGTTAAGGATGTTGCTAAGGGATGATGAGGACGCCAGGACATTTATGGGTGCTAATGGATTTGTTGAAGCACTTACGCAGTTTCTCCAATCAGCTTTGCGTGAAGGAAATGCGATGGATCAAGAAAATGGAGCTATGGCCCTGTTCAACCTTGCTGTGAACAATGACAGAAACAAGGAACTGATGATATCAGCCGGAGTCTTATCCTTGTTGGACGAAATGATCTATAAACCTACTTGCTATGGGTGTGCAACTGCCCTGTATCTAAATCTCTCTTGCCTTGAAGAAGTCAAGCCTATGATTGGTTCAGGTCAGGCTGTCCCATTCCTAGTCAAGATTCTTAAATCCAGCTCTGATGTTCAATGCAAGCTAGATTCGCTCCACACACTCTATAATCTTTCCACCGTACCCACCAACATTCCATACCTCCTTTCATCTGGAATCATTGTTGGCTTGCAATCCCAGCTTGTAGGCCAGGGTGATAGTGTGTGGACCGAAAAATGCATAGCTGTATTGATAAATTTGGCGGTTTCTCAATTGGGTAGAGAGGAAATTGTGTCATCTCCAGGAATCATAAGCACATTGGCGTCAATACTCGACACTGGTGAGCTCCTAGAGCAAGAGCAAGCCGTCGCATGTCTCCTAATTTTGTGTAACCGGAGCAAGAAATGTTGCGAGATGGTCCTTCAAGAAGGGGTCATCCCAGCTTTCTGTGGAAAAGCAAGAGCTATTCTGTTTACCAGTGTTAGGTCTCAGTGCAAATCTTTCGATGCCTAG 2106 0.4207 MMDVAELEENLFAASDAKLHGEMCRTLSAIYCKILTIFPSLEAAKPRSKSGIQALCSLHVALEKSKNVLQHCSECSKLYLAITGDAVLQKFEKAKSALVDSLKLVEDIVPQSIGCQVEKIVEELASTVFAIDPLEKQVGDDLIALLQQGRKLDNSNDSSELECFHQAATRLGITSSRAALTERRALKKLIERAQAEEDKRKESIIAYLLHLMRKYSKLFRSEFSDDNDSQGSQPCSPTVNGYVEDGVQTQAFDRVFSKLSSINLKPNNRKSGQMPLPPEELRCPISLQLMSDPVIIASGQTYERACIEKWFSDGHNTCPKTQQKLPHLLLTPNYNVKNLVASWCAQNGIPIPEGPPESLDFNYWRLALSDTDSTNSKSVNSVNSCKLKGAKVVPVEESGMSEQTGVAGAESVSTQEDDNEQYLSFLKVLTEGNDLQGKCKVVQRLRMLLRDDEDARTFMGANGFVEALTQFLQSALREGNAMDQENGAMALFNLAVNNDRNKELMISAGVLSLLDEMIYKPTCYGCATALYLNLSCLEEVKPMIGSGQAVPFLVKILKSSSDVQCKLDSLHTLYNLSTVPTNIPYLLSSGIIVGLQSQLVGQGDSVWTEKCIAVLINLAVSQLGREEIVSSPGIISTLASILDTGELLEQEQAVACLLILCNRSKKCCEMVLQEGVIPAFCGKARAILFTSVRSQCKSFDA 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02499 701 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 463 509 IPR000225 GO:0005515
Arst3g02499 701 PANTHER U BOX DOMAIN-CONTAINING 24 679 - -
Arst3g02499 701 SMART Ubox_2 280 343 IPR003613 GO:0004842|GO:0016567
Arst3g02499 701 FunFam RING-type E3 ubiquitin transferase 276 350 - -
Arst3g02499 701 Coils Coil 176 196 - -
Arst3g02499 701 SUPERFAMILY RING/U-box 276 352 - -
Arst3g02499 701 CDD RING-Ubox_PUB 278 330 IPR045210 -
Arst3g02499 701 Gene3D - 419 686 IPR011989 -
Arst3g02499 701 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 350 IPR013083 -
Arst3g02499 701 ProSiteProfiles U-box domain profile. 276 350 IPR003613 GO:0004842|GO:0016567
Arst3g02499 701 Pfam U-box domain 278 347 IPR003613 GO:0004842|GO:0016567
Arst3g02499 701 SUPERFAMILY ARM repeat 428 681 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02499 Arst-Chr3 33925792 33931138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02499 2 680 U-box Gene Family AT1G24330 67.153 0.0 930