Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02482 ATGACCACTGGCTTGACCTCGATTGAGCAACATGCCGCCTCGGTGTATACGAGAGAAGTCTTTACTGATGTCAAGAAACAGATAGTCCAAGCTGCAGCGTTGATTCTTATATCCAAGAAAAGGTGCCTTAACACAATGGTCTATATGGTTGAGGAGTACGAGCAGCCAGCTACGAGAATCAAGGTTGCCTATGGCAGGTCCACGGGCAAAATTGACTGCCAATGTAACTTTTGGAGGAAGAATGGGTACCCCTGTAGACATATGTTCTTTGTGATGAAGTCCGAACATGTAACTACCATCCCGGATGCACTTGTGTTGCAGAGATGGCGATTAAACGCGAAGGCCATAGAGAGTTACGTCGAGAGGTGGGGTGGCACCAGTGAGGCCGGGTTTTTGCTTCGACACGACGAGTTTTTGGGTGAATATGAAGATGTCGCGACATTAGATGTGGATGACATAAAGCGGATGCGGTGGGATAGTGTTGACGCTGCTTATGAGTTTTACAGGAGGCTGGGAATGTGTCATGGATTCGGCGTCAGGAAGGGTGATTCAGGCAAAGACTGTAGAGGAAATCTGATTAGATATAGGTTTTTTTGTAACAAGGAAGGGTTGAGGGATGGGAGACACAACGACCGAGTTGATAGACGGAGGGCACACAAACCTGAGACACGAACCAATTGTGAGGCTAAGCTCTCCATATACTTTGATAAGATTGAGCGTTGTTGGAAGGTGCGAAAAGTTGCGACAGAACATAATCACGACTTGACGCCCGCATCAATGGTCCATCTGATAGCCAACCATCGTGAAATGACCGATGCAGCAAAGGCTCAGATTGATGGGTTGCATGCTAGTGGCATTGCGACATCGAAGATTGTTGGATACATGGCCGGAATGGCTGGTGGGTACTCGTTGTTGGGTTTCTTGAAGAAGGATGTGTACAACTACGCCGACAGAACCCGGCGCGCTAACATATCAGATGGCGATGCGAATGCGGCTGTTGTTTATCTGGAGGGAAAGGCTGGTTCGGATCCCATGTCGGTTGCTAGATATAGTGTAACAAAAGACGCAAGGCTGGCAAATTTAATTTGGGCCGATGGAGCTAGTAGAGTTGATTATCAACATTTTGGAGATGTGCTGGCCTTCGACTCGACATATAAGAAAAACAACTCTTTTAGAAGGTGGTTGTATGTTGACATGGAAATAGAGGAGTTCGAGATGGAATGGGAGCGTGCGGTTGCTGAGTATGACCTATATGACAAGGAGTGGGCCACCCAAATGTATGAGAGGAGGATGATGTGGGCAAATGCATATCTGCAAGGCAAGTTTTGCGCCGGTTTCCGGACAACGTCTCGATGTGAAGGGGTTAATGCCTTTGTAAAAAAGTTCTCGAAGACAACGCACACTATACTTGAGTTGGTTCAGAATTTGGAATTGGTGGTCCGGGAGTACCGAAACAAAGATTACTACTCCACTTCAACTCAATGA 1485 0.47 MTTGLTSIEQHAASVYTREVFTDVKKQIVQAAALILISKKRCLNTMVYMVEEYEQPATRIKVAYGRSTGKIDCQCNFWRKNGYPCRHMFFVMKSEHVTTIPDALVLQRWRLNAKAIESYVERWGGTSEAGFLLRHDEFLGEYEDVATLDVDDIKRMRWDSVDAAYEFYRRLGMCHGFGVRKGDSGKDCRGNLIRYRFFCNKEGLRDGRHNDRVDRRRAHKPETRTNCEAKLSIYFDKIERCWKVRKVATEHNHDLTPASMVHLIANHREMTDAAKAQIDGLHASGIATSKIVGYMAGMAGGYSLLGFLKKDVYNYADRTRRANISDGDANAAVVYLEGKAGSDPMSVARYSVTKDARLANLIWADGASRVDYQHFGDVLAFDSTYKKNNSFRRWLYVDMEIEEFEMEWERAVAEYDLYDKEWATQMYERRMMWANAYLQGKFCAGFRTTSRCEGVNAFVKKFSKTTHTILELVQNLELVVREYRNKDYYSTSTQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02482 494 Pfam SWIM zinc finger 69 88 IPR007527 GO:0008270
Arst3g02482 494 PANTHER OS01G0519700 PROTEIN 7 116 - -
Arst3g02482 494 Pfam FAR1 DNA-binding domain 166 256 IPR004330 -
Arst3g02482 494 SMART 26again6 71 98 IPR006564 GO:0008270
Arst3g02482 494 ProSiteProfiles Zinc finger SWIM-type profile. 58 96 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02482 Arst-Chr3 33599279 33609031 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst3g02482 FAR1 4.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02482 - - adu:107478643 1005.36