Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02467 ATGGGAAGACACTCTTACTGTTACAAGCAGAAGCTTTGGAAGGGTCTATGGTCTCCTAAAGAAGATGAAAAGCTTCTCAGACATATCATTAAGTACGGTCATGGATGTTGGAGCTCTGTTCCTAAGCAAGCAGGTTTGCAGAGGTGTAGTAAGAGTTGCAGGCTTAGGTGGATCAATTACTTAAGGCCTAATTTAAAGTGCAACATGTCACATAGTGTAGCAAAACAGAATGCATCAACTTCAGAGTTCAGATACCATTCACTAAAAAATTGTGCACAGGTGAATGGATATGAAACTAGGATATTGAGCACAAGTGAGCACAGGTGA 327 0.4067 MGRHSYCYKQKLWKGLWSPKEDEKLLRHIIKYGHGCWSSVPKQAGLQRCSKSCRLRWINYLRPNLKCNMSHSVAKQNASTSEFRYHSLKNCAQVNGYETRILSTSEHR 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02467 108 Gene3D - 14 66 - -
Arst3g02467 108 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst3g02467 108 SMART sant 13 63 IPR001005 -
Arst3g02467 108 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Arst3g02467 108 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst3g02467 108 PANTHER MYB DOMAIN PROTEIN 55 1 69 - -
Arst3g02467 108 FunFam MYB transcription factor 11 67 - -
Arst3g02467 108 CDD SANT 17 61 IPR001005 -
Arst3g02467 108 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02467 Arst-Chr3 33241248 33242166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02467 1 66 MYB Transcription Factor Family AT4G01680 89.394 2.41e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst3g02467 Myb_DNA-binding 3.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02467 K09422 - adu:110278510 237.269