Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02430 ATGTTGCCAAACAAGGCCTGCCTTCTCGCTTTCCTCCTCCTCCTCCGGAGTACCATCCATTTAACCGCAGCCATTGGTGTCTCTGTTGGGGTTGGTGGTGGTTTTGGAGTAGGCGTGGGCATTGGCAATGGCAATGGCAATGTTGGCAATGGCAACACCCCATCAGAGCCTCCCTCATCAAAGTTGGAGAGTGCCTACAAAGCTCTCCAGGCATGGAAATCAGCCATCTCCGATGACCCTCTCAAGCTTCTAGATTCATGGGTTGGTCCTAATGTCTGCTCCTACAAAGGAGTGTTCTGTTCACCCCCTCAAGACGATGAAATCTCTTCTCTTTCAACATCTACTGCCACCGCCAACGTTGTAGTTGCAGGAATCGACCTCAACCATGCAAATCTCCAAGGAACTCTCGTCAAAGAACTCTCTTTACTGGTTGACATGTCTCTTCTTCACCTCAATAGTAACAGGTTCAGTGGCACAGTTCCCGACACATTCAAAGACCTCGTTTCTCTGGAAGAACTGGACCTCAGCAACAACCACCTCTCTGGTCCATTCCCCATTGTTACTCTCTACATGCCAAGCCTCCTTTACTTGGACCTCAGATTCAACTTATTCTCAGGTCAACTCCCTGATGAACTCTTCAACAGGAAGCTGGATGCCATATTCCTCAACAACAACCAATTCCAAGGTGAGATCCCTCAGAGCTTGGGAAATTCACCAGCATCGGTGATCAATCTGGCTAACAACAAGCTCAGTGGGAACATTCCAACAAGTTTTGGGCTCATGGGGAATAAGCTCAAAGAGGTTCTGTTCCTCAACAACCAGCTAACAGGTTGCATCCCTGAAGGGGTGGGTCTGTTTGATGAACTTGAAGTGTTTGATGTGAGCTTCAATTCACTCATGGGGCACTTGCCAGACACAATATCATGCTTGCAAGACATTGAGGTTCTCAATCTGGGACACAACAAGCTCTCAGGAGAGTTATCTGATGTGATCTGCTCCTTGACAAGTTTGGTGAACCTCACCGTTGCTTACAACTTCTTCTCTGGTTTGAGCCAGCAATGCAGCAGGCTTTTCAACATTGGCTTTGATTTCTCAGGAAACTGCATTCCTGGTAGAGACATGCAGAGACCTCAACCAGAGTGTTCTGTTATTCCAGGTGGCACCCTCAATTGCCTTAGAATCCCTACTCCAAGGCCTCTTGTTTGTGCTTCTTTGCCTCGAATCATCTTCACCAATAATATGCAATCATCCTCACAACATACTTCTTCTTCTTCATATCCTTGA 1284 0.472 MLPNKACLLAFLLLLRSTIHLTAAIGVSVGVGGGFGVGVGIGNGNGNVGNGNTPSEPPSSKLESAYKALQAWKSAISDDPLKLLDSWVGPNVCSYKGVFCSPPQDDEISSLSTSTATANVVVAGIDLNHANLQGTLVKELSLLVDMSLLHLNSNRFSGTVPDTFKDLVSLEELDLSNNHLSGPFPIVTLYMPSLLYLDLRFNLFSGQLPDELFNRKLDAIFLNNNQFQGEIPQSLGNSPASVINLANNKLSGNIPTSFGLMGNKLKEVLFLNNQLTGCIPEGVGLFDELEVFDVSFNSLMGHLPDTISCLQDIEVLNLGHNKLSGELSDVICSLTSLVNLTVAYNFFSGLSQQCSRLFNIGFDFSGNCIPGRDMQRPQPECSVIPGGTLNCLRIPTPRPLVCASLPRIIFTNNMQSSSQHTSSSSYP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02430 427 Pfam Leucine rich repeat 149 203 IPR001611 GO:0005515
Arst3g02430 427 Gene3D Ribonuclease Inhibitor 63 238 IPR032675 -
Arst3g02430 427 Gene3D Ribonuclease Inhibitor 239 360 IPR032675 -
Arst3g02430 427 PRINTS Leucine-rich repeat signature 310 323 - -
Arst3g02430 427 PRINTS Leucine-rich repeat signature 170 183 - -
Arst3g02430 427 Pfam Leucine rich repeat N-terminal domain 64 101 IPR013210 -
Arst3g02430 427 FunFam Leucine-rich repeat extensin-like protein 1 66 237 - -
Arst3g02430 427 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 53 398 - -
Arst3g02430 427 SUPERFAMILY L domain-like 65 359 - -
Arst3g02430 427 ProSiteProfiles Leucine-rich repeat profile. 169 190 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02430 Arst-Chr3 32492589 32494147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02430 61 384 Leucine-rich Repeat extension Gene Families AT3G24480 50.926 2.45e-104 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02430 - - gmx:100820611 582.022