Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02427 ATGAATAAGATGGATCTGATAGATGCGAAGCTGCAAGAAGAGCATCAATTGTGTGCATCATCGTGGAAACAGTGCCCCGCTTGTGGACATAAGTTTGAAGGCAGCAGCGGGAAGAAGGGGGAGTGGGAGTGGGTAGGTCTGCCAGCAGGAGTGAAGTTCGATCCAACAGACCAAGAACTGATAGAGCATCTAGAAGCAAAAGTAGAGGCAAAGAGATCGCACCCTTTGATCGATGAGTTCATTCCCACCATCGAAGGAGAAGATGGAATCTGTTACACCCATCCCGAGAAACTTCCAGGTGTGACGAGGGATGGGTTGAGCAGACACTTCTTTCACAGGCCATCAAGGGCGTACACCACTGGAACACGGAAGAGAAGAAAGATTCTTCAAAACGATGAGGCAGAGGCCGAGAGAGGAGAGACACGGTGGCACAAGACCGGTAAGACAAGGGCCGTTATGCTCAAGGGAAAGCAGAAGGGGTGCAAGAAGATTCTGGTGCTGTACACCAACTTCGGCAAGAACAGGAAGCCCCAGAAGACCAACTGGGTCATGCATCAGTACCACCTCGGACTCCATGAAGAGGAGAAAGACGGGGAGCTCGTCGTCTCTAAGATTTTCTACCAAACTCAGCCCAGGCAATGCAGTTGGTCTTCTTCTTCTTCTTCTTCTTCAATTACTGCTGCTGCTCCCCCTGTCAAAACTAATAATGACACTTGTCCCGTTCTTGGATTCCCTCCTATGGAACATTTCAGCAGCTTCATCCCTCTCAGAAAAACCCTCCATAATGAGGTGATTAATTTATCATAA 807 0.4882 MNKMDLIDAKLQEEHQLCASSWKQCPACGHKFEGSSGKKGEWEWVGLPAGVKFDPTDQELIEHLEAKVEAKRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSRAYTTGTRKRRKILQNDEAEAERGETRWHKTGKTRAVMLKGKQKGCKKILVLYTNFGKNRKPQKTNWVMHQYHLGLHEEEKDGELVVSKIFYQTQPRQCSWSSSSSSSSITAAAPPVKTNNDTCPVLGFPPMEHFSSFIPLRKTLHNEVINLS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02427 268 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Arst3g02427 268 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Arst3g02427 268 SUPERFAMILY NAC domain 42 208 IPR036093 GO:0003677|GO:0006355
Arst3g02427 268 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 6 232 IPR044799 GO:0003700
Arst3g02427 268 FunFam NAC domain-containing protein 73 56 212 - -
Arst3g02427 268 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02427 Arst-Chr3 32383157 32384786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02427 2 227 NAC Transcription Factor Family AT5G56620 68.619 2.35e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g02427 NAM 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02427 - - ahf:112790160 532.717