Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02420 ATGAAGAGTCATAATTATCTACTTATATTATTGATTATTGTTGTGATTGTAGTTTTTAATTGTTGTTTCAACATTCGATGTGATTGGAGAGACGAATCTTACGAAGTCTACGTGAACGGGATTGTTGGTCAATTTCGAGAGAATGTGCCTAACGCTTCCATTATGGTATGCAATTTTCGCGAGGAAAACACTAAAAGCAAGTTGGATAACATATTCTCTAAGCATGAAATTAATCTCATGAACTATCCTTGCCACCACCATGGTTTCCCTATGCTCAAATTGGAGGCCATACATCATTTTCTAAATTCATGTGATAGTTGGCTCTCACATGGGCAAAATAAGGTGTTGTTAATGCATTGTGAGCGTGGTGGCTTGCCAGTTTTGGCCTTCATGTTGGCTGCATTGTTGATTTTCTTGAAACAATATGAAGGGGAGCAGAGGACGTTAGATATGGTTTACAAGCAGGGAGAGCGTGATGATAAAATCAAAGTCAATATCAACTGTCGGATTCAAGGTGATGTGCTGATTGAAAGTGTTAATTTGGATAGTGACTTGGAAAATGAACAGATGATATTCCAAACGATGATTAACACAAATTTCATTAGATCTAATTTGTTGATGCTTAATCGGGAGAAAATTGATATTTTGTGGGATGCAAAAGATCGCTTCCCAAGGGATTTCAAACTAGAGATAACTTTCACAGAGAAAGATGTTGCTCCAAAGACTGAGTCATCCTCTAGCTTTGAGGAAAGGGAGGGATTACCAATTGAAGAATTTACCAAAGCCAAAGAGATTTTTAACCATGGAGATTGGACGAGTCCTAATGATGAAGATCACACAGTAAATGATACTAACACAATCAATGATACCTCAATTTCACCACAAACACCTCCATTGAGGTCTCCCAGAAGTGATAAAAATGTTGATGAGTCTCTTCCTCATCAATTGCATTCAAAATCACAAAATCCTAATACTGATGTAACAAGACCTGATTTGTTGCTTTCACAGCAAAAAATCCAACCCCCACTGGATCAAATTAGAGCTCCTCTATCCCCACCAACTCCTCCAAAGAATGAAACAATTGTAAGAGTTGGATCCCCTCTTTCTCCTCCAACTCCAAATGCTACAATGCCTACTACCACCCCACCTCCGCCGCCAACGCCACCCCCGGTTGGAGACCATTACGCTAACAATGGTTTTCCAACTTCATTGTGTATTGGTCGTGGAAAGAATGACACTGGCAATCACACGATGCATTCAATGAGTAACACCAAAAAGTTAAAAACATTGCATTGGTTAAAATTATCTCGAGCAGTGAAAGGAAGTTTGTGGGCTGAGGCACAAAAATCTGGTGAAGCTTCCAAGACACCAGATATTGATATGTCTGAGCTTGAAAATCTCTTCTCAGCAATAACACCAAGTTTAGGCCAAGCAAAGAAATCAAAGATCCAAAACTTAGTTACACCAAAATCTGATAAAGTGCAACTGATTGAACATACACGAGCATATAATTGTGAAATCCTTCTCTCAAAAGTGAAAGTCCCGTTGAAGGATTTAATGAGCTCAGTTTTAGCATTAGAAGAGACAGCATTAGATATTGATCAGGTTGAGAACCTGATAAAGTTTTGTCCAACAAAGGAAGAGAAGCAAGTACTTAAGGATTATGACGGAGACAAGGAAAAATTGGGGAGATGTGAACAGTTCTTCTTAGAGTTGATGAAAGTTCCAAGGGTAGAATCCAAGCTGAGAGTTTTTTCATTCAAGATTGAATTCAACACTCAGGCTTATGACCTTAGAAATAACATCAATATTGTTAATGCTGCTGCAGAAGAGATCAAAAACTCTGTCAAATTAAGAAGAATCATGCAAACAATACTTTCTCTGGGAAATGCTCTAAACCAAGGAACTGCAAAAGGTTCTGCCATTGGATTTAAATTAGATAGTCTTCTTAAACTCTCAGAGACACGTGCACGGAATACAAAGATAACTCTCATGCATTATCTTTGTAAGGTTTTGGAAAATAAGCTTCCAGAAGTTTTAGACTTCACAAATGATCTTCCGAATTTAGAGCCAGCAACAAAGATCCAAATGAACTTCCTTGCAGAGGAGATGCAAGCAGTAAGTAAAGGATTAGAAAAAGTTGAGCATGAACTACTAACTTCAGAAAATGATGGTTCTATATCAGAAATTTTCTGCAAGAATCTGAAAGAGTTCCTACGTTCTGCGGATGTTGAAGTCCGTGCATTGGCTTCGCTATATTCTATTTTGGGTAGGAATGTGGATGCCTTAATTATTTATTTTGGAGAAGATCCATCTCGCTGCACTTTTGAGCAAGTTGTCACAACATTGCACAACTTCACTGGAATGTTTTGTAAAGCCCAGGAAGAGCACTTCAAGGAGCTTGAGCTTGAAATGAAGAAAACAAAAGAAAAAGATAAAAAGAAATACAAAAAGATAAAAAGAAATACCAATCAAAACTGTCACTAG 2487 0.3784 MKSHNYLLILLIIVVIVVFNCCFNIRCDWRDESYEVYVNGIVGQFRENVPNASIMVCNFREENTKSKLDNIFSKHEINLMNYPCHHHGFPMLKLEAIHHFLNSCDSWLSHGQNKVLLMHCERGGLPVLAFMLAALLIFLKQYEGEQRTLDMVYKQGERDDKIKVNINCRIQGDVLIESVNLDSDLENEQMIFQTMINTNFIRSNLLMLNREKIDILWDAKDRFPRDFKLEITFTEKDVAPKTESSSSFEEREGLPIEEFTKAKEIFNHGDWTSPNDEDHTVNDTNTINDTSISPQTPPLRSPRSDKNVDESLPHQLHSKSQNPNTDVTRPDLLLSQQKIQPPLDQIRAPLSPPTPPKNETIVRVGSPLSPPTPNATMPTTTPPPPPTPPPVGDHYANNGFPTSLCIGRGKNDTGNHTMHSMSNTKKLKTLHWLKLSRAVKGSLWAEAQKSGEASKTPDIDMSELENLFSAITPSLGQAKKSKIQNLVTPKSDKVQLIEHTRAYNCEILLSKVKVPLKDLMSSVLALEETALDIDQVENLIKFCPTKEEKQVLKDYDGDKEKLGRCEQFFLELMKVPRVESKLRVFSFKIEFNTQAYDLRNNINIVNAAAEEIKNSVKLRRIMQTILSLGNALNQGTAKGSAIGFKLDSLLKLSETRARNTKITLMHYLCKVLENKLPEVLDFTNDLPNLEPATKIQMNFLAEEMQAVSKGLEKVEHELLTSENDGSISEIFCKNLKEFLRSADVEVRALASLYSILGRNVDALIIYFGEDPSRCTFEQVVTTLHNFTGMFCKAQEEHFKELELEMKKTKEKDKKKYKKIKRNTNQNCH 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02420 828 MobiDBLite consensus disorder prediction 267 328 - -
Arst3g02420 828 SMART it6_source 417 826 IPR015425 -
Arst3g02420 828 MobiDBLite consensus disorder prediction 371 387 - -
Arst3g02420 828 Pfam Formin Homology 2 Domain 422 790 IPR015425 -
Arst3g02420 828 SUPERFAMILY Formin homology 2 domain (FH2 domain) 382 808 - -
Arst3g02420 828 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 161 235 IPR035892 -
Arst3g02420 828 ProSiteProfiles Formin homology-2 (FH2) domain profile. 417 816 IPR015425 -
Arst3g02420 828 MobiDBLite consensus disorder prediction 278 302 - -
Arst3g02420 828 MobiDBLite consensus disorder prediction 340 359 - -
Arst3g02420 828 ProSiteProfiles C2 tensin-type domain profile. 76 236 IPR014020 -
Arst3g02420 828 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 154 IPR029021 -
Arst3g02420 828 Coils Coil 697 717 - -
Arst3g02420 828 MobiDBLite consensus disorder prediction 365 387 - -
Arst3g02420 828 PANTHER FORMIN-J 305 819 - -
Arst3g02420 828 Coils Coil 791 811 - -
Arst3g02420 828 SMART PTEN_C2_2 125 235 IPR014020 -
Arst3g02420 828 Gene3D - 134 238 - -
Arst3g02420 828 MobiDBLite consensus disorder prediction 314 328 - -
Arst3g02420 828 Gene3D Formin, FH2 domain 415 801 IPR042201 -
Arst3g02420 828 Pfam C2 domain of PTEN tumour-suppressor protein 154 235 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02420 Arst-Chr3 32316502 32338926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02420 363 815 Protein tyrosine phosphatase (PTP) family AT5G58160 63.736 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02420 - - ahf:112775940 1217.22