Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02402 ATGGAGATTGTAAAATTCTTGTACTTGAATCTTCTCGCGACTTTCACATTCTCAGTGGTTTTAGCAATGGACCCTTATTCAGAGGCACTCCTGGGCCTGAAATCTGAGCTTGTAGATGATGATAACACACTGCATGATTGGAAAGTACCCTCTCAACAAGGGAACTCAACAGAATCCTATGCATGTTCTTGGACAGGTATCAAGTGTAACAACGACTCAACAGTTGTAACCTCCATAGACCTCTCAATGAAGAAACTCGGTGGCGTAATCTCAGGGAAACAATTCACCATCTTCACAAACCTTGTTGATCTCAACCTCAGCTACAACTTCTTCTCTGGCCAGCTTCCAGTGCAAATTTTCAACCTCAAAACCCTGAAAAGCCTTGATATCAGCAGAAACAACTTCTCTGGTCACTTTCCAAATGGAATTTCCAGCCTCCAAAATCTTCTTGTACTTGATGCCTTTAGCAACAGCTTTTCAGGTCCATTGCCTGCAGAACTTTCGCAGCTACAGAATCTCAAGGTTCTTAATCTAGCTGGGAGTTACTTCAGTGGACCAATTCCATCTGAGTATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTTGCAGGGAATTCTCTCACAGGGAATATTCCTTCAGAACTTGGAAACCTCAAAACAGTGACCCATATGGAGATTGGTTACAACAATTATGACGGTCTTATACCGCCACAATTGGGTAACATGAGTCAGATTCAGTATCTTGACATAGCAGGTGCAAATCTCTCAGGCCCCATACCAAAGCAACTCTCCAACCTCACCAGTTTGCAATCACTATTCCTGTTCCGGAACCAGCTCACAGGATCAATACCAAGTGAGTTGGGCAATATAAAAAATCTCACAAATTTAGATTTATCTGATAACTTCCTTTCAGGGTTTATTCCAGAGAGCTTTTCAGAGTTAAAGAACCTAAGACTGCTGAGTCTCATGTACAATGACATGACTGGCAATGTTCCACAAGGCATAGGTGGACTTCCGTCCTTGGAAACCCTTCTCATTTGGAACAACCGGTTCTCCGGATTACTTCCACAGAGCCTGGGGAGCAACTCTAAACTCAAGTGGGTGGATGCATCCACAAACAACTTGGTTGGCAGCATTCCACCGGACATTTGTGCAACTGGAGAGCTGTTTAAGTTGATCTTGTTCTCAAACAAATTCACAGGAGGTCTCTCCCCTCTCTCTGATTGTTCTTCCCTTGTTCGCCTTCGCCTCGAAGATAACTCATTCTCCGGAAGGATCCCTCTCAGATTCAGCCATCTTCCTGATATTTCATATGTTGACCTGTCCCACAACAACTTTGTTGGTGGGATTCCCTCCGATATTTCTCAAGCATATCAACTTCGGTATTTCAATGTATCTTATAATCCACGATTAGGAGGCACCATCCCCGCACGAATATGGTCTTTGCCCATACTTCAAAACTTTTCATCATCTTCTTGCGGTATTTCAGGTGATCTTCCTCAGTTTGAGTCCTGTAAGTCAATTTCAATTATTGATCTAGATAGGAACAACTTATCTGGAACTATACCAAACAGCTTTTCCAAATGTCAGGCTCTTGAAAAACTGAACTTGTCGAACAACAATATGATAGGTCATATACCAGAAGAACTAGCCAGTATCCCTGTTCTTAGTGTTATAGACCTATCAAATAATAAGATCAATGGCCCCATACCTGAGAAGTTTGGTAGTTCTTCAAGTTTACAACTTCTCAATGTGTCCTTCAACAATATCACTGGTTCAATTCCAACAGGGAAGTCATTCAAATTGATGGGTAGCAATGCATTTGTTGGGAATCCTGAGCTTTGTGGAGCACCGCTTCGACCATGTCCTGGTTCAGTTGGAATATTGGGGAGCAAAGGAACATGGAGGCTTACCCGTATTCTGCTACTCTGTTTAGGGTCGTTAGTAATCCTTCTAGGAGTCGCTTTTGGAACACTTTATTTAAGAAGAGGGATCAAAAGTCGATGGAAGATGGTCTCATTTGCTGGACTCCCACAATTCACAGCAAATGATGTTTTGACAAGCTTCAGTGGCACAAAAACAACAGAAGTTCCATCACCATCACCACCTTTGGTTTCAAAGGCGGTTCTCCCTACAGGGATAACAGTCGTAGTTAAGAAGATTGAATGGGAACAGAGGAGCATCAAGGTCATGTCGGAATTCATAATTCGCCTTGGAAATGCGAGGCACAAGAACTTGATCAGATTATTGGGGCTATGCCACAATAATCAGTTAGTCTATCTTCTGTATGATTATGTGCCCAACGGGAATTTGGCTGAAAAAATTGGAAGGAAGTGGGACTGGGCAGCTAAGTTCAGAACTGTGGTTGGAATCGCAAGGGGACTAAGATTCCTTCACCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAATCAAGCAACGTTGTGTTTGATGAAAATATGGAACCCCATTTGGCTGAATTTGGGTTCAAACATCTGTTAAGGTTGACCAACGGCTCATCTCCTGCTACAACCAAGTGGGAAACAGAATATAATGAAGCCGTGAAAGAGGAACTCAGAATGGATGTCTACCAATTCGGAGAGATGACTCTGGAAATTTTAACTGGAGGAAGGTTGACTAATGCAGCAGCTACCATACAAAACAAACCATGGCATGTTCTTCTCAGAGAAATTTACGACGAGAATGAAGTCAGTTCCACCAGTACAATGCAGGAGATCAAACTGGTTCTCGAGGTTGCTATGCTTTGCACTAGCAGCAGGTCAAATGATCGACCATCGATGGATGATGCTCTGAAGCTTTTGCCAGGGATCAAACCTATAGAAGATGGCAGAGCTTCAAGAAAATGA 2871 0.4284 MEIVKFLYLNLLATFTFSVVLAMDPYSEALLGLKSELVDDDNTLHDWKVPSQQGNSTESYACSWTGIKCNNDSTVVTSIDLSMKKLGGVISGKQFTIFTNLVDLNLSYNFFSGQLPVQIFNLKTLKSLDISRNNFSGHFPNGISSLQNLLVLDAFSNSFSGPLPAELSQLQNLKVLNLAGSYFSGPIPSEYGSFRSLEFLHLAGNSLTGNIPSELGNLKTVTHMEIGYNNYDGLIPPQLGNMSQIQYLDIAGANLSGPIPKQLSNLTSLQSLFLFRNQLTGSIPSELGNIKNLTNLDLSDNFLSGFIPESFSELKNLRLLSLMYNDMTGNVPQGIGGLPSLETLLIWNNRFSGLLPQSLGSNSKLKWVDASTNNLVGSIPPDICATGELFKLILFSNKFTGGLSPLSDCSSLVRLRLEDNSFSGRIPLRFSHLPDISYVDLSHNNFVGGIPSDISQAYQLRYFNVSYNPRLGGTIPARIWSLPILQNFSSSSCGISGDLPQFESCKSISIIDLDRNNLSGTIPNSFSKCQALEKLNLSNNNMIGHIPEELASIPVLSVIDLSNNKINGPIPEKFGSSSSLQLLNVSFNNITGSIPTGKSFKLMGSNAFVGNPELCGAPLRPCPGSVGILGSKGTWRLTRILLLCLGSLVILLGVAFGTLYLRRGIKSRWKMVSFAGLPQFTANDVLTSFSGTKTTEVPSPSPPLVSKAVLPTGITVVVKKIEWEQRSIKVMSEFIIRLGNARHKNLIRLLGLCHNNQLVYLLYDYVPNGNLAEKIGRKWDWAAKFRTVVGIARGLRFLHHDCYPAIPHGDLKSSNVVFDENMEPHLAEFGFKHLLRLTNGSSPATTKWETEYNEAVKEELRMDVYQFGEMTLEILTGGRLTNAAATIQNKPWHVLLREIYDENEVSSTSTMQEIKLVLEVAMLCTSSRSNDRPSMDDALKLLPGIKPIEDGRASRK 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02402 956 Gene3D Phosphorylase Kinase; domain 1 703 765 - -
Arst3g02402 956 Gene3D Ribonuclease Inhibitor 284 373 IPR032675 -
Arst3g02402 956 FunFam Leucine-rich repeat receptor-like protein kinase TDR 189 288 - -
Arst3g02402 956 FunFam Leucine-rich repeat receptor-like protein kinase 23 188 - -
Arst3g02402 956 SMART LRR_typ_2 98 122 IPR003591 -
Arst3g02402 956 SMART LRR_typ_2 194 218 IPR003591 -
Arst3g02402 956 SMART LRR_typ_2 266 289 IPR003591 -
Arst3g02402 956 SMART LRR_typ_2 338 361 IPR003591 -
Arst3g02402 956 SMART LRR_typ_2 290 313 IPR003591 -
Arst3g02402 956 FunFam Leucine-rich repeat receptor-like protein kinase TDR 680 765 - -
Arst3g02402 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Arst3g02402 956 FunFam Leucine-rich repeat receptor-like protein kinase TDR 766 950 - -
Arst3g02402 956 Gene3D Transferase(Phosphotransferase) domain 1 766 953 - -
Arst3g02402 956 SMART serkin_6 680 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02402 956 Pfam Leucine Rich Repeat 125 146 IPR001611 GO:0005515
Arst3g02402 956 Pfam Protein tyrosine and serine/threonine kinase 713 939 IPR001245 GO:0004672|GO:0006468
Arst3g02402 956 SUPERFAMILY RNI-like 306 595 - -
Arst3g02402 956 Gene3D Ribonuclease Inhibitor 374 625 IPR032675 -
Arst3g02402 956 Gene3D Ribonuclease Inhibitor 187 283 IPR032675 -
Arst3g02402 956 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Arst3g02402 956 SUPERFAMILY L domain-like 60 380 - -
Arst3g02402 956 Gene3D Ribonuclease Inhibitor 25 186 IPR032675 -
Arst3g02402 956 PANTHER OS04G0122200 PROTEIN 391 926 - -
Arst3g02402 956 FunFam Leucine-rich repeat receptor-like protein kinase TDR 311 624 - -
Arst3g02402 956 Pfam Leucine rich repeat 292 345 IPR001611 GO:0005515
Arst3g02402 956 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Arst3g02402 956 SUPERFAMILY Protein kinase-like (PK-like) 705 942 IPR011009 -
Arst3g02402 956 ProSiteProfiles Protein kinase domain profile. 645 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02402 Arst-Chr3 31659385 31662800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02402 2 942 Receptor kinase-like Gene Family AT5G51350 53.782 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst3g02402 PK_Tyr_Ser-Thr 6.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02402 - - aprc:113852384 1535.78