Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02400 ATGAATAGGCTCTTGTTTTTGTTTCTTAATCTCGTTCTTCTTTGCACATTGTTCATTTTACTTTACTTAAAGAAACGAAAATATTTGGCAATGGATGGACGGAATTTTCGCGCGATTGATTCACATTATGTATTTGACAGTTCTGAGGTGCGTTTCAGGCATGCTGGCCCTGTACCACACACAGGTCGGCAAATGTATCGACGCAATAGAAGAGGACTTTCCAGAACAACTCTTGGACGGGGAAATTTTCCTGCCATTGAGTTAGTCCAAGTTGATGGTGTCGCGGTGCTTGTTAATCATTATATAGACACGGAATTGCGCGTTGAAGATATGTCTTATGAGGGATTGAATGCATTGGGCCAGCAGATTGGCCATGTAAGCACTGGTTTATCAGAGGAAATAATAACCAATCAAATGAAGACAAAAACATATTTAATGGCTGCTAGTGCTGTTAATTTGGAGGAGGCAACTTCTCAGGAGGTAGAAGCTGATGTTTGTATAATATGCCAGGATGAATACAAGAACCAAGATATGATTGGAGTTCTTCAATGTGAGCATGAATATCATGCTGATTGTTTAAGGAAATGGTTGCTTGTGAGGAATGTCTGCCCCTTGTGCAAATCAGAAGCATTCATTCTAGGGGTGTAA 648 0.4028 MNRLLFLFLNLVLLCTLFILLYLKKRKYLAMDGRNFRAIDSHYVFDSSEVRFRHAGPVPHTGRQMYRRNRRGLSRTTLGRGNFPAIELVQVDGVAVLVNHYIDTELRVEDMSYEGLNALGQQIGHVSTGLSEEIITNQMKTKTYLMAASAVNLEEATSQEVEADVCIICQDEYKNQDMIGVLQCEHEYHADCLRKWLLVRNVCPLCKSEAFILGV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02400 215 FunFam E3 ubiquitin ligase BIG BROTHER 126 211 - -
Arst3g02400 215 SUPERFAMILY RING/U-box 165 211 - -
Arst3g02400 215 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 55 211 IPR045191 GO:0061630
Arst3g02400 215 CDD RING-H2_RNF24-like 164 210 - -
Arst3g02400 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 128 211 IPR013083 -
Arst3g02400 215 ProSiteProfiles Zinc finger RING-type profile. 166 207 IPR001841 -
Arst3g02400 215 Pfam Ring finger domain 165 207 IPR001841 -
Arst3g02400 215 SMART ring_2 166 206 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02400 Arst-Chr3 31574673 31576299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02400 63 211 C3H Transcription Factor Family AT2G15530 38.667 3.26e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02400 K19041 - adu:107478552 399.823