Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02365 ATGGCTGTAACCGACCGGTGTTTCGTGGAATGGAAAGAGCATTTTGTTTCCCAAGAGCGTGGCAACCGTGTGGTCCACTATTACCTGAAGGATTCTGATGGGGAATCCATACTTGCTGTTGTGGGCACTGAGAGGAGTGTTAGACACATGTTCTACGTTGTCGCCGATGAGTTTTTGGAAATTTGTGGGAAGGAAGGTTCTGTTCCTGCCGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTTGATTGGCTGACGTCAACACTTTCAAAGCAGCATCTTCAAGGAGATAGAAGTGGATCACCTAGTCATTCTTCAGGACATGCTTATGATACCACAAATGGTAGTGTCAATGAAATTACTGGTCTTCCTGCTCCGATAGCGAATGGCAAGGGATTTCTAACCCGAAACTCCAAATTATCCAAGTCTGACATTGTTTGGTCTGGAGTGGCGTGGACGTGTGGCAAGCAGCTTAAACATTATCATGCTTTTTGCAGGAATGGCATCAAAATAATTGTTCAATCATTTGTTTTTGTCATGGGCAAGGGCGAGAATCATTATGTTGCTTATTTAGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTCAAAGCGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTGATTCCCATACGAAATCCACATCCTCGGGAAGTTTTCATCACACCATATTCTCAAGTCATTAGTGCAGAGTGTATTGATGGTCCTGCCGCGGTCTTAAGTCGTGAACACTATGAAAAATGCATGCCTTGCTTTTCCCCAACTTCATCTGATAGAATACATATGTGCTTTAGGCAATTTAGGAGCAACAAAGTCAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTATGATCAACCAATTCTTTCTTGCTTGCAATTTGATTCTATGCTGAACCCCAAGGGAAATAGCCTAGCAGGAGGAGATGAAGAGTTGAGTGCAGGTGAAAATGTAAAGCTCAGAACCAAGAGAAGGGATAGGGGAACTCCTCAGTCTTTGATGGATCGACAAGGAGTTAGGAAGTTAGTTAGGAGTCAGCAAATGATGGTATACAAAAACTCTCAGGGTGTAAATAATTCTAGGACAGATAGGAAATTGTTTTCTCAGAAGGAAGTTGAATCTCAACCTTGGTATAATGTCACATACAAGATTGATGACAAGATAGAGGTCCTCTGTCAGGATAGCGGTATCAGAGGCTGCTGGTTCAGGTGTACGGTTGTGCAGGTATCTCGGAAACAGATGAAAGCCCAATATGATGATATTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTACTTTCAAGTTGGCCATGCCAGATAAACTTGGGATGAGACATCCTGGCCGATCAACAATCAGGCCAGCTCCTCCAACCTCTGACGATCAAGAATTGGTTATTGGGGTTGGAACTGCAATTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGAGTTGTAACTGAAACTGATAACTATGTTGATGATAATGTGCAAGCATACTTTCCTGGTGAACGGTTGCTAATGAAAGTAAGCAAGAAAGATCTAAGAATATCTAGAGATTGGTCCGGGGACAAGTGGATTGGTATTAAGCCGAAGCTCGATATAGCCTCAACTATATTCGACATAAATGGCGTTAACACGAAGCATTCCACGTCCCCAGCTAAAGACGGGGACTCTGTTGGTGCTGCAAATTCATGTGATGAAGTTCCGGCAAGTGACGAGGCTATTAATGAACCAGATTTTGCTGAAGAAAAGGTTGAGGGTGTTGCTGAAGATGGGGATAACAATGATGATGATGGTGATAATGATAATAATAATAATAATCTTTTGTCAGAAAAAGATACTGAAGTAGATAATAATGTGATCGAGATGAATAGCACTGGTAATGAAGATAATGGTGATGATTCTAATGACAATGATGACAATGTTGATAACACGGACAGCGAAAACGATAACGATAACAAGGAGACGGAGGCGTTTGGCACTTCCGTGGCGGACGGTAAAGCCGGGGAACCCGTGGAAATGGCTGTATAA 2067 0.4315 MAVTDRCFVEWKEHFVSQERGNRVVHYYLKDSDGESILAVVGTERSVRHMFYVVADEFLEICGKEGSVPAGFKWRSRREVVDWLTSTLSKQHLQGDRSGSPSHSSGHAYDTTNGSVNEITGLPAPIANGKGFLTRNSKLSKSDIVWSGVAWTCGKQLKHYHAFCRNGIKIIVQSFVFVMGKGENHYVAYLEDMYEDRRGQKKVKARWFHHNQEVKGVIPIRNPHPREVFITPYSQVISAECIDGPAAVLSREHYEKCMPCFSPTSSDRIHMCFRQFRSNKVKPFDLSKLRGYYDQPILSCLQFDSMLNPKGNSLAGGDEELSAGENVKLRTKRRDRGTPQSLMDRQGVRKLVRSQQMMVYKNSQGVNNSRTDRKLFSQKEVESQPWYNVTYKIDDKIEVLCQDSGIRGCWFRCTVVQVSRKQMKAQYDDIQDEDGSGNLEEWIPTFKLAMPDKLGMRHPGRSTIRPAPPTSDDQELVIGVGTAIDAWWSDGWWEGVVTETDNYVDDNVQAYFPGERLLMKVSKKDLRISRDWSGDKWIGIKPKLDIASTIFDINGVNTKHSTSPAKDGDSVGAANSCDEVPASDEAINEPDFAEEKVEGVAEDGDNNDDDGDNDNNNNNLLSEKDTEVDNNVIEMNSTGNEDNGDDSNDNDDNVDNTDSENDNDNKETEAFGTSVADGKAGEPVEMAV 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02365 688 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Arst3g02365 688 Pfam Agenet domain 394 469 IPR008395 -
Arst3g02365 688 SMART BAH_4 168 287 IPR001025 GO:0003682
Arst3g02365 688 CDD Tudor_Agenet_AtDUF_rpt1_3 391 469 - -
Arst3g02365 688 MobiDBLite consensus disorder prediction 560 688 - -
Arst3g02365 688 MobiDBLite consensus disorder prediction 644 658 - -
Arst3g02365 688 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 379 643 - -
Arst3g02365 688 Gene3D - 135 292 IPR043151 -
Arst3g02365 688 Pfam BAH domain 172 272 IPR001025 GO:0003682
Arst3g02365 688 SMART agenet_At_2 476 534 IPR014002 -
Arst3g02365 688 SMART agenet_At_2 389 454 IPR014002 -
Arst3g02365 688 CDD BAH_plant_1 163 292 - -
Arst3g02365 688 MobiDBLite consensus disorder prediction 613 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02365 Arst-Chr3 30936765 30942026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02365 403 532 PHD Transcription Factor Family AT5G58610 30.075 5.23e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02365 - - gmx:100306240 918.687