Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02341 ATGGTACCCAAAAGCAAGGCTATAAAGGCAGATCCTTGCCAGCCCTCATGGGACCCGCAAGCCTTGCAAGATGATTACTCTGCACCAAACAGTAACAATAATTCTTCCTTTTCAGTACCAACACAGATAGTGTCTCATGCCTATGACTCAGCTTTTGCCTCTTTTCAATTCCAATATCCATGGCCTTTAGCCTTTGAAGGGTTTCCAGAAGATAGAGCTGCAAGTGCTTCTAAGAGCCATAGCCAAGCAGAGAAAAGAAGAAGGGACAGGATCAATGCACAGCTTGCAACTCTTAGAAAACTGATTCCTAAGTCTGATAAGATGGACAAGGCTGCATTACTAGGGAGTGTAGTAGATCATGTGAAGGATCTAAAGCGAAAAGCGATGGATGTGAGCAAAAGCATCACAGTTCCAAGTGAAACTGATGAAGTAACAATAATAGAGTGTGACCCTGATCAAGATGAAAGCTATGCTAAAGTGAAGATACTAAAGCACAACATTGTAATTTCAGTTTGCTGTGATGATAGACCAGAACTTTTCAGTGAACTCATTCAAGTCCTAAAAGGGTTGAGGCTCATAAATCAAGATCAGAACATATTTAGAAGCAGCAAACAGCTAATAGAAGCAGCAAAACAGAAGCAGCAAAACATACTCAAAATAAAAAACATCAGAAAATCAGAATCCAAAATCAAGAAGGCAACATAG 705 0.4014 MVPKSKAIKADPCQPSWDPQALQDDYSAPNSNNNSSFSVPTQIVSHAYDSAFASFQFQYPWPLAFEGFPEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMDVSKSITVPSETDEVTIIECDPDQDESYAKVKILKHNIVISVCCDDRPELFSELIQVLKGLRLINQDQNIFRSSKQLIEAAKQKQQNILKIKNIRKSESKIKKAT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02341 234 PANTHER TRANSCRIPTION FACTOR BHLH30 56 192 IPR045847 GO:0003700|GO:0006355
Arst3g02341 234 Pfam Helix-loop-helix DNA-binding domain 78 124 IPR011598 GO:0046983
Arst3g02341 234 Gene3D - 70 133 IPR036638 GO:0046983
Arst3g02341 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 128 IPR036638 GO:0046983
Arst3g02341 234 Coils Coil 223 234 - -
Arst3g02341 234 MobiDBLite consensus disorder prediction 1 36 - -
Arst3g02341 234 CDD bHLH_AtAIG1_like 70 147 - -
Arst3g02341 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 124 IPR011598 GO:0046983
Arst3g02341 234 MobiDBLite consensus disorder prediction 20 36 - -
Arst3g02341 234 SMART finulus 81 130 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02341 Arst-Chr3 30471246 30473217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02341 22 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 39.560 5.00e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst3g02341 HLH 6.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02341 - - adu:107478510 432.95