Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02253 ATGTTGATAACGGTCAGGGATGCTTCCTTTTCTTCTCCACTCTGTTCTTGGCACCGTCGTTTCAGCACAAAACTCAAATATTCAATTTTCCGAGCGAGTTTTTCTGTCCAGAGGACACCCAACACTACCCTCACATGGAATCCCAGCTATGATGCATCGAATTTCGATCCCTTGGGTATTAACCCGGATTTATCTTCCCGGTTAAATTCTACTTGGGAGAATGTAGTCTCCTTGTTTTCGCAAACTTTTGAGAGTGCTTCAAGTACAGACAAGGAAAAGCCTAATTCTTCACGAGGAATAGCAGCTGCTATAGAGGATAGTTCAATTGATTTTGGAGATTTCTTTAAAGGTCCATTGCCAGGAAAGTTTCTCAAGCTTTTAGGGTTTCTTGCCTTGTCACGTCTTGGTGTGTATATTCCTCTAGGTGGGGTTAATAGGGAGGCTTTTGTTGGAAATTTAGATCAGAATAGTTTGTTAAGCACTCTGGACTCGTTTTCTGGAGGCGGTATTGGTAGGCTTGGGATATGTTCCCTTGGTATTGTTCCCTTCATCAATGCACAAATTGTTTTCCAGCTTCTTGCACAGGTATATCCAAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAGTTCTTCAATACACTCGATATGCCTCAGTTGGATTTGCAATTGTACAGGCAATTGGCCAAGTCCTCTTTTTACGTCCTTATGTGAATGACTTTAGTACCGAGTGGGTTCTTTCATCTATTATCTTGTTGACTCTTGGCTCTGTGTTTACAACATACATCGGTGAACGAATCACAGACCTAAAACTCGGCAATGGCACCTCTCTTTTGATATTTACAAACATTATCTCTTACTTGCCAGCTTCTTTTGGTCGAACAATTGCACAGGCATTTAACGATGCTAATTATATTGGACTTGCTACCATCATTGTGTCCTTCTTTTTGTTGGTAGTTGGTATTGTCTATGTTCAGGAAGCAGAGAGAAAAATTCCTCTTAACTATGCTTCAAGATTCACTAGCAAAACCAGAGGACTTGAAAAATCTGCCTACTTACCCTTTAAGGTAAATAGTTCTGGGGTAATGCCCATCATATTCTCTACATCATCATTAGCTCTTCCCGGTACTTTAGCACGCTTCACTGGTTTGAATGCATTGAAGCAAACTGCAGTAGCTTTGAACCCAGGGGGCTCCTTCTATGTTCTATTTAACATACTTTTGATTGCCTTCTTCAATTACTATTACACCTTCCTACAATTGGATCCTGATGATGTGAGTGAGCAATTGAAACGACAAGGTGCTTCAATTCCACTTGTCAGACCTGGCAGAAGTACAGCTGCATTTATCAAAACAGTTCTTAGTCGAATATCAGTTCTGGGTTCAACGTTTCTGGCTATTTTGGCTGCTGGTCCAGCAGTTGTTGAGCAGACAACGCACTTGACTGCATTCAGGGGATTTGCAGGAACGTCGATTCTTATTCTTGTTGGTTGCGCAACAGATACGGCTAGAAAAGTTCAAGCTGAGATCATATCTCAGAAGTACAAGAACATAGAATTCTATGATTTCGACAAGTACTGA 1593 0.4105 MLITVRDASFSSPLCSWHRRFSTKLKYSIFRASFSVQRTPNTTLTWNPSYDASNFDPLGINPDLSSRLNSTWENVVSLFSQTFESASSTDKEKPNSSRGIAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLFLRPYVNDFSTEWVLSSIILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFNDANYIGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRFTSKTRGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLNALKQTAVALNPGGSFYVLFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTAAFIKTVLSRISVLGSTFLAILAAGPAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 123 141 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 173 193 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 247 272 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 273 296 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 492 510 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 403 425 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 458 476 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 215 238 - -
Arst3g02253 530 PRINTS Preprotein translocase SecY subunit signature 364 383 - -
Arst3g02253 530 Gene3D SecY subunit domain 114 519 IPR023201 -
Arst3g02253 530 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 115 522 IPR002208 GO:0015031|GO:0016020
Arst3g02253 530 NCBIfam preprotein translocase subunit SecY 122 519 IPR002208 GO:0015031|GO:0016020
Arst3g02253 530 ProSitePatterns Protein secY signature 2. 266 283 IPR030659 -
Arst3g02253 530 FunFam Preprotein translocase subunit SECY, chloroplastic 114 519 - -
Arst3g02253 530 SUPERFAMILY Preprotein translocase SecY subunit 115 513 IPR023201 -
Arst3g02253 530 ProSitePatterns Protein secY signature 1. 174 193 IPR030659 -
Arst3g02253 530 Pfam SecY 175 506 IPR002208 GO:0015031|GO:0016020
Arst3g02253 530 Hamap Protein translocase subunit SecY [secY]. 111 523 IPR026593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02253 Arst-Chr3 28459811 28463927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02253 26 530 Chloroplast and Mitochondria Gene Families AT2G18710 81.836 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02253 K10956 - gmx:100810430 869.381