Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02246 ATGGGAGTTCCGGAGAAGGATCCTCTTTCTCAATTGAGCTTACCTCCTGGTTTTAGATTTTACCCCACAGATGAGGAGCTTCTTGTTCAGTACCTATGTCGCAAGGTTGCTGGCAACCATTTCTCACTTCCTATCATCGCGGAAATCGATTTGTATAAATTCGACCCTTGGATCCTCCCAGGTAAAGCAATATTTGGGGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAGTATCCGAACGGTTCGCGACCGAACAGGGTTGCTGGCTCTGGGTACTGGAAAGCCACAGGAACAGATAAAGTAATCACTACCGAAGGCAGAAAAGTTGGAATCAAGAAAGCACTTGTTTTCTACATTGGCAAAGCACCCAAAGGCACCAAAACAAACTGGATCATGCACGAGTACCGTCTCCTCAACGGTTCTCAAAAGAGCCTCGGCAGCACCAAGCTAGATGATTGGGTTTTGTGTCGGATATACAAGAAGAACTTGAGCTCATCGCAAAAAGTCAATATGCCAAGCTTTACGAGCAAAGAATGGAGCAATGGATCGTCTCCTTCTTCATCGTCTCACATCGACGACATGCTCGAATTGCCGGAGATCGACGACCGGTGCTTCGCCTTACCGCGGGTTAACTCGCTGCAGCACGAGGAAAAGCTCACCCTTGGCGCCACAGGCAATAATTTCCCGGACTGGGTCAACTCGGGGGGTCTCGACTCGGTCCCTGAGTTCGGGAGCCAAACTCAGGGGATGACAAGTTACGATGGAAATGACCTATATGTCCCCTCCGCGTCACAGTTCTGCCACGTCAACACAATGGTTGTGCCGGGTAACCCGACGGAGGAGGAAGTCCAGAGCGGCATCAGGACCCAGCGGATTGATGAGAATTTCGGGTTATTTCAACAGAATTCGAATGTATTCACCCACCGGTATTTGTCGAGTTCGGGTGACTCATTCGGATTCGGATACCCGAATCAGCAATTTGGATTCGGATTCAGAGAATGA 1008 0.4921 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGNHFSLPIIAEIDLYKFDPWILPGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLNGSQKSLGSTKLDDWVLCRIYKKNLSSSQKVNMPSFTSKEWSNGSSPSSSSHIDDMLELPEIDDRCFALPRVNSLQHEEKLTLGATGNNFPDWVNSGGLDSVPEFGSQTQGMTSYDGNDLYVPSASQFCHVNTMVVPGNPTEEEVQSGIRTQRIDENFGLFQQNSNVFTHRYLSSSGDSFGFGYPNQQFGFGFRE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02246 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 219 - -
Arst3g02246 335 MobiDBLite consensus disorder prediction 174 193 - -
Arst3g02246 335 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Arst3g02246 335 FunFam NAC domain-containing protein 72-like 23 169 - -
Arst3g02246 335 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Arst3g02246 335 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Arst3g02246 335 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02246 Arst-Chr3 28283449 28285097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02246 1 331 NAC Transcription Factor Family AT4G27410 56.410 4.07e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g02246 NAM 4.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02246 - - adu:107478293 665.225