Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02245 ATGGGAGTTCCGGAGAAGGATCCTCTTTCTCAATTGAGCTTACCTCCTGGTTTTAGATTTTACCCCACAGATGAGGAGCTTCTTGTTCAGTACCTATGTCGCAAGGTTGCTGGCAACCATTTCTCACTTCCTATCATCGCGGAAATCGATTTGTATAAATTCGACCCTTGGATCCTCCCAGGTATATATTTGATAAGGGATAATGACATTATTTCTGTGATTGAGAGCAAGATGTTTATCTATTTGGGTTCTTTTTCTGCAGGTAAAGCAATATTTGGGGAGAAAGAATGGTACTTTTTCAGCCCCAGGGATAGAAAGTATCCGAACGGTTCGCGACCGAACAGGGTTGCTGGCTCTGGGTACTGGAAAGCCACAGGAACAGATAAAGTAATCACTACCGAAGGCAGAAAAGTTGGAATCAAGAAAGCACTTGTTTTCTACATTGGCAAAGCACCCAAAGGCACCAAAACAAACTGGATCATGCACGAGTACCGTCTCCTCAACGGTTCTCAAAAGAGCCTCGGCAGCACCAAGCTAGATGATTGGGTTTTGTGTCGGATATACAAGAAGAACTTGAGCTCATCGCAAAAAGTCAATATGCCAAGCTTTACGAGCAAAGAATGGAGCAATGGATCGTCTCCTTCTTCATCGTCTCACATCGACGACATGCTCGAATTGCCGGAGATCGACGACCGGTGCTTCGCCTTACCGCGGGTTAACTCGCTGCAGCACGAGGAAAAGCTCACCCTTGGCGCCACAGGCAATAATTTCCCGGACTGGGTCAACTCGGGGGGTCTCGACTCGGTCCCTGAGTTCGGGAGCCAAACTCAGGGGATGACAAGTTACGATGGAAATGACCTATATGTCCCCTCCGCGTCACAGTTCTGCCACGTCAACACAATGGTTGTGCCGGGTAACCCGACGGAGGAGGAAGTCCAGAGCGGCATCAGGACCCAGCGGATTGATGAGAATTTCGGGTTATTTCAACAGAATTCGAATGTATTCACCCACCGGTATTTGTCGAGTTCGGGTGACTCATTCGGATTCGGATACCCGAATCAGCAATTTGGATTCGGATTCAGAGAATGA 1089 0.4784 MGVPEKDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGNHFSLPIIAEIDLYKFDPWILPGIYLIRDNDIISVIESKMFIYLGSFSAGKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLNGSQKSLGSTKLDDWVLCRIYKKNLSSSQKVNMPSFTSKEWSNGSSPSSSSHIDDMLELPEIDDRCFALPRVNSLQHEEKLTLGATGNNFPDWVNSGGLDSVPEFGSQTQGMTSYDGNDLYVPSASQFCHVNTMVVPGNPTEEEVQSGIRTQRIDENFGLFQQNSNVFTHRYLSSSGDSFGFGYPNQQFGFGFRE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02245 362 ProSiteProfiles NAC domain profile. 14 190 IPR003441 GO:0003677|GO:0006355
Arst3g02245 362 SUPERFAMILY NAC domain 88 190 IPR036093 GO:0003677|GO:0006355
Arst3g02245 362 FunFam NAC domain-containing protein 72-like 23 196 - -
Arst3g02245 362 Pfam No apical meristem (NAM) protein 15 166 IPR003441 GO:0003677|GO:0006355
Arst3g02245 362 MobiDBLite consensus disorder prediction 201 220 - -
Arst3g02245 362 Gene3D NAC domain 23 194 IPR036093 GO:0003677|GO:0006355
Arst3g02245 362 SUPERFAMILY NAC domain 10 68 IPR036093 GO:0003677|GO:0006355
Arst3g02245 362 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02245 Arst-Chr3 28283449 28285099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02245 1 358 NAC Transcription Factor Family AT4G27410 54.945 5.21e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g02245 NAM 5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02245 - - adu:107478293 730.709