LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g02195	ATGAAGATCGGATGGGACTTAGTAACTCGAAAAGAATATTTCTTATCATCTTGGAAGAGCGACGATGATCCGTCCGAGGGAGAGTATTTTCTAAGAATAGTAACAAAAGGATATCCACAGTTTTTCACATTCAAGGGATCAAAAAAGATATTCAGAGGAGGATCTTGGAATGGAGTGGGTTTTTCAGGTTATCCAACTCATCAACTGTCACAATATAGACAACGATTTCTCATGAATGATAAACAAGTGTTTTTAGAATGCGATATACTTGACAAATCAATTGTCTCAATATATAAACTAAGAGCTTCTGGCCTAGGACAAACTTACGCTTGGACTAATCAGAGTAACACCAGAAATGTCATCTCCACCGGCGTTCAAGACGAGTGCGAACGCTTCGCTTTGTGCGGTGCCAACTCTGTATGCATTCTCGATGGTAATCTTCCAACCTGTGAATGCCTGAAAGGCTATGTTCCTAAGTTTCCTGAACAATGGAATATATCGTATTGGTCTAACGGTTGTGTTGCGAGGAATGTTAAATCTGATTGTGTCAATGGAAGTAGCAGTGATGGGTTCTGGAAATATACAGAGATGAAATTGCCGGACACTTCTTTTTCATGGTTCAATGAGATCTTGAGCCTTGAGGATTGTCGAAACAAGTGTTTGGAGAATTGTTCTTGTACTTCTTATTCGAACTTGTATGTTCTTGATGGAGGGAGTGGCTGTTTACTTTGGTTTGATGATATGGTTGACATGAGGAGATTCACTCAAGGGGGACAAGATCTTTATATCAGAGTCCCTGCTTCTGAACTAGATAATGGCCGCAGAAAGAAGATGATGCTAATAATAGGAATAACAGTTGGTGGGATTATTTTTGGATTAACATGTGCCTGCGCATTGATACTCAGAAAGCGAGGGGTAGCAAGATTTATTTACAGGAAGCATTATGAAAGTATACTGAAAAAAGAAGAGATTTATCTACCAACATTTGACTTTTCAGTCATTGTTAAAGCCACTCAAAACTTCTCAAGCTGTAACAAACTAGGTGAAGGTGGTTTCGGACCAGTATACAAGGGCACATTGACAAATGGTCAAGAGTTAGCTGTGAAAAGGCTTTCGAAAAATTCTGGACAAGGATTGGAAGAGTTTAAAAATGAAGTGGTGTTGATAGCTAAACTTCAGCATCGTAATCTTGTAAAGCTTCTTGGATGCTGCATAGAGGAAGAAGACATAATGTTGATCTATGAATATATGCCCAATAAAAGCTTGGACAACTTTATTTTCGATGAAACTAGAAGGCACCTGCTGGAATGGCCTAAGCGTTTCAATATTATTTGTGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGGTTAAGAATTATTCATAGAGATCTAAAAACCAGCAATATTCTACTTGATGCAAATCTGGATCCAAAAATATCTGATTTTGGCTTAGCTCGAACGTTGTTAGGAGATCAAATTGAGGCAAATACAACTAAAGTTGCTGGAACATATGGTTATATGCCTCCTGAATATGCTGTACGTGGGCATTTCTCTACGAAATCAGACGTCTTCAGTTATGGAGTGATAGTTTTAGAGATTGTAAGTGGAAAAAAGATCAGAGAATTTTCCGATCCAGAACAGTGTCATAATCTTCTTGGATACGCATGGAGGCTATGGAGTGAAGGAAGACAATTAGAACTACTAGATGAAGCATTAGGGGAAAGGTTCACACCTTCTGAAGCAACAAAATGCATACAAGTTGGCCTACTATGCGTTCAACAAAGGCCAGAAGATAGGCCTAACATGTCATCTGTTGTTTTGATGCTAAATGGTGAAAAATTATTGCCCAATCCAAAAGTTCCTGCATTTTACATTGAAAGAGATACCATTCCTGAATTAGATGCTTTGTTGGAAAATTGCATGTCGCGAAATGAAGTTTCCATCACAGTGTTAGAAGCTAGATAA	1974	0.3845	MKIGWDLVTRKEYFLSSWKSDDDPSEGEYFLRIVTKGYPQFFTFKGSKKIFRGGSWNGVGFSGYPTHQLSQYRQRFLMNDKQVFLECDILDKSIVSIYKLRASGLGQTYAWTNQSNTRNVISTGVQDECERFALCGANSVCILDGNLPTCECLKGYVPKFPEQWNISYWSNGCVARNVKSDCVNGSSSDGFWKYTEMKLPDTSFSWFNEILSLEDCRNKCLENCSCTSYSNLYVLDGGSGCLLWFDDMVDMRRFTQGGQDLYIRVPASELDNGRRKKMMLIIGITVGGIIFGLTCACALILRKRGVARFIYRKHYESILKKEEIYLPTFDFSVIVKATQNFSSCNKLGEGGFGPVYKGTLTNGQELAVKRLSKNSGQGLEEFKNEVVLIAKLQHRNLVKLLGCCIEEEDIMLIYEYMPNKSLDNFIFDETRRHLLEWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARTLLGDQIEANTTKVAGTYGYMPPEYAVRGHFSTKSDVFSYGVIVLEIVSGKKIREFSDPEQCHNLLGYAWRLWSEGRQLELLDEALGERFTPSEATKCIQVGLLCVQQRPEDRPNMSSVVLMLNGEKLLPNPKVPAFYIERDTIPELDALLENCMSRNEVSITVLEAR	657

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g02195	657	ProSiteProfiles	PAN/Apple domain profile.	182	266	IPR003609	-
	Arst3g02195	657	Pfam	S-locus glycoprotein domain	51	160	IPR000858	GO:0048544
	Arst3g02195	657	SMART	serkin_6	341	612	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g02195	657	Pfam	PAN-like domain	182	251	IPR003609	-
	Arst3g02195	657	ProSiteProfiles	EGF-like domain profile.	125	162	IPR000742	-
	Arst3g02195	657	ProSiteProfiles	Protein kinase domain profile.	341	618	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst3g02195	657	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	100	635	-	-
	Arst3g02195	657	Pfam	Protein tyrosine and serine/threonine kinase	344	610	IPR001245	GO:0004672\|GO:0006468
	Arst3g02195	657	Gene3D	Hepatocyte Growth Factor	182	263	-	-
	Arst3g02195	657	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	307	416	-	-
	Arst3g02195	657	CDD	PAN_AP_plant	178	266	-	-
	Arst3g02195	657	Gene3D	Transferase(Phosphotransferase) domain 1	417	619	-	-
	Arst3g02195	657	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	181	265	-	-
	Arst3g02195	657	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	462	474	IPR008271	GO:0004672\|GO:0006468
	Arst3g02195	657	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	417	620	-	-
	Arst3g02195	657	CDD	STKc_IRAK	347	614	-	-
	Arst3g02195	657	SUPERFAMILY	Protein kinase-like (PK-like)	324	625	IPR011009	-
	Arst3g02195	657	Gene3D	Phosphorylase Kinase; domain 1	315	416	-	-
	Arst3g02195	657	SMART	ntp_6	186	265	IPR003609	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g02195	Arst-Chr3	27475555	27479342	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g02195	280	627	Receptor kinase-like Gene Family	AT4G23190	51.821	3.45e-123	376

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Arst3g02195		PK_Tyr_Ser-Thr	6e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst3g02195	-		-	aprc:113865090	924.08