Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02178 ATGACTAATTTATTTCCACAAGTAGAGAAGATTACAACCATTCGAAAATTCTCTTCTTACTTGCTGTTAATTATTTGGTTCTTTCTAGTGTCTTGCGTGAGAACTTCCACTTCAACAGATCGGTTGGGAACGGGTCAATCTATGAGAGATGGTGAGACCTTAGTTTCGGTTGATGGAAGCTTTGAACTGGGTTTCTTCAGTCCTAAATCTAGTACAAGTCGGTATTTGGGTGTGTGGTACAGAGATGCATCAAGAAACCCAACAGTAGTGTGGGTGGCCAATAGAGAAAGACCCCTTCAAAGCACGTCCGGACTCTTGAAATTCAGTGACAAAGGAATTCTTCAACTTCTCAATGACGCAAACACTAGTATTGTTTGGTCATCCAACATATCTTCATCCCTCCAAGCTTCAAATAACTTAACTGCACAACTCTTGGACTCGGGAAATCTTGTTGTGAAGTACCAACACGCTATGTTGCACAGCCAACAGGATGCTGCCGAGGACTTCTTCTTGTGGCAGAGTTTTGACTATCCTTCTGATACGTTGATGCCAGGAATGAAACTTGGATTAAACCTAGTTACTAGTCTGAATAGATTTCTATCGTGTTGGAAAAGCTCAAATGACCCTGGTATAGGAGAGTATTCTTTAAAAATCAAACCCAGAGGGTATCCGCAACTAGTTCAAATGAAGGGATCCGTAATAGTTACTAGAGCAGGACCATGGAATGGTCTTTCTTTTTCAGGGTATCCATATGCCATGAACATATATAGCATCGATTTTGTAGTGAATGATAAAGAGATCTATTATCAGGTCACAATGAGTGATAGGTCCCTTTTCTCCATATACAGAACAATCACTTCAGGTACGGGTAATGTTTTGGTTTGGACAAGTCAAATAAGAAATCAGGTTAAAAACACTCCAACTGAGCTGGTAGATCAATGTGAAATGTATGCCTTTTGTGGTTCAAATTCTATATGCTATATGGATGGTAATGCTCCAACATGTGAATGTTTGAAAGCATATGTTTCCAAATTTCCCAAACAATGGAATATGTCTGATTGGTCTAGTGGTTGTGTCAGAAAGACTTTGTTAGATTGTAATAACACAGATGGGTTCTTGAGGTACAGAGATATGAAGTTGCCAGATACATCTTCATCAACGTATAATAAGACAATGAATCTTGAGGAATGTCGACAATCCTGCTTGAAAAACTGTTCTTGTACAGCGTATGCGAATATGGATATTCGTAATGGAGGAAGTGGCTGCCTACTTTGGTTTGATCATCTCATTGACATGAGGATGTTCACTAAAGGAGGACAAGACCTTTACATTAAAGTCCCTGCTTCAGAATTAGCGGCTAACGGCCATGGGAATATGAAAAATAAGAACGTTGGAATCATAGTAGGTTCGGTTATCTTTGGATTAATCGCATGCGCTGGCACAATGTCGATGATAATTAAAAAGAAAGGTGTAGCAAGAAATATATGCAAGAAAAAGCATAGTTGGAAAGATATCGATCTACCGATATTTGATTTTTCAGTCATAGCTAAAGCTACAGGAAACTTTGCATCTAATAAAAAGCTTGGAGAAGGTGGTTTCGGTCCCGTATATAAGGGCATACTTCAAGATGGTCGAGAAGTAGCTGTAAAAAGGCTTTCAAAAAGGTCTACTCAAGGGCTGGAAGAATTAAAAAATGAGGTGGCGTTGATAGCTAAACTTCAGCATCGGAATCTTGTCAAGCTTCTTGGTTGTTGTATTCAAGAGTCAGAAAAAATACTAATCTATGAGTTCATGCCTAACAGAAGTTTAGACCAATTTATTTTCGATGAAACTGGACGAAAGTTGCTAGATTGGCTAAAGCGTTTCAACATTATTAGTGGCATCGCTCGAGGACTTTTTTATCTTCATCAAGATTCTATATTGAGGATAATTCATAGAGATTTAAAAACCAGTAATATTTTGTTAGATGGAAATTTTAATCCTAAGATATCAGATTTTGGTTTAGCTCGAACATTCTTAGATGATCAAGTTGAAGAAAATACAAATAGGATTGCTGGAACATACGGTTATATACCTCCTGAATATGCAGTACGAGGACAATTCTCTATGAAGTCAGATGTATTTAGTTATGGTGTAATAGTATTAGAGTTGATAAGTGGAAAGAAGAATAGGGAATTCTCAAACTCTGAAAATGACCTTAATCTTCTTGGATATGCATGGAAATTGTGGATTAATGAGAGGCCACTGGAATTATTGGATGAAGTATTAAGGGAATGGTGCAACCCCACTGAAGTCATAAGATGCATACAAGTAGGTTTATTATGTGTGCAACAAAGGCCAGAAGATAGGCCTAACATGTTATCGGTGGTTCTAATGCTAAATGGTGAGAAATGGTTGCCCCAACCGAAATTTCCTGCATTTTATGTAGATTGTGCTGGGACACCGAAAGAAGAATCTTTATCGGCAAACTATGTAAAATTCTCAGCTAATGAAGTTTCCATCACAATGTTGGATGCAAGATAA 2523 0.3793 MTNLFPQVEKITTIRKFSSYLLLIIWFFLVSCVRTSTSTDRLGTGQSMRDGETLVSVDGSFELGFFSPKSSTSRYLGVWYRDASRNPTVVWVANRERPLQSTSGLLKFSDKGILQLLNDANTSIVWSSNISSSLQASNNLTAQLLDSGNLVVKYQHAMLHSQQDAAEDFFLWQSFDYPSDTLMPGMKLGLNLVTSLNRFLSCWKSSNDPGIGEYSLKIKPRGYPQLVQMKGSVIVTRAGPWNGLSFSGYPYAMNIYSIDFVVNDKEIYYQVTMSDRSLFSIYRTITSGTGNVLVWTSQIRNQVKNTPTELVDQCEMYAFCGSNSICYMDGNAPTCECLKAYVSKFPKQWNMSDWSSGCVRKTLLDCNNTDGFLRYRDMKLPDTSSSTYNKTMNLEECRQSCLKNCSCTAYANMDIRNGGSGCLLWFDHLIDMRMFTKGGQDLYIKVPASELAANGHGNMKNKNVGIIVGSVIFGLIACAGTMSMIIKKKGVARNICKKKHSWKDIDLPIFDFSVIAKATGNFASNKKLGEGGFGPVYKGILQDGREVAVKRLSKRSTQGLEELKNEVALIAKLQHRNLVKLLGCCIQESEKILIYEFMPNRSLDQFIFDETGRKLLDWLKRFNIISGIARGLFYLHQDSILRIIHRDLKTSNILLDGNFNPKISDFGLARTFLDDQVEENTNRIAGTYGYIPPEYAVRGQFSMKSDVFSYGVIVLELISGKKNREFSNSENDLNLLGYAWKLWINERPLELLDEVLREWCNPTEVIRCIQVGLLCVQQRPEDRPNMLSVVLMLNGEKWLPQPKFPAFYVDCAGTPKEESLSANYVKFSANEVSITMLDAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02178 840 Pfam PAN-like domain 366 432 IPR003609 -
Arst3g02178 840 ProSiteProfiles Bulb-type lectin domain profile. 39 165 IPR001480 -
Arst3g02178 840 Gene3D Hepatocyte Growth Factor 363 443 - -
Arst3g02178 840 SMART blect_4 45 178 IPR001480 -
Arst3g02178 840 CDD STKc_IRAK 528 795 - -
Arst3g02178 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 34 175 - -
Arst3g02178 840 SUPERFAMILY Protein kinase-like (PK-like) 507 810 IPR011009 -
Arst3g02178 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Arst3g02178 840 Gene3D - 34 175 IPR036426 -
Arst3g02178 840 Pfam S-locus glycoprotein domain 237 344 IPR000858 GO:0048544
Arst3g02178 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 89 209 IPR036426 -
Arst3g02178 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 365 446 - -
Arst3g02178 840 Gene3D Transferase(Phosphotransferase) domain 1 598 799 - -
Arst3g02178 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 487 597 - -
Arst3g02178 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 780 - -
Arst3g02178 840 ProSiteProfiles Protein kinase domain profile. 522 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02178 840 CDD B_lectin 50 178 IPR001480 -
Arst3g02178 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Arst3g02178 840 Gene3D Phosphorylase Kinase; domain 1 496 597 - -
Arst3g02178 840 ProSiteProfiles PAN/Apple domain profile. 366 447 IPR003609 -
Arst3g02178 840 Pfam Protein tyrosine and serine/threonine kinase 525 790 IPR001245 GO:0004672|GO:0006468
Arst3g02178 840 SMART ntp_6 367 446 IPR003609 -
Arst3g02178 840 PIRSF SRK 12 840 IPR024171 GO:0004674
Arst3g02178 840 SMART serkin_6 522 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02178 840 Pfam D-mannose binding lectin 88 204 IPR001480 -
Arst3g02178 840 CDD PAN_AP_plant 362 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02178 Arst-Chr3 27154298 27159098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02178 510 840 Receptor kinase-like Gene Family AT4G23140 52.924 2.75e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst3g02178 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02178 - - adu:107464241 1076.23