Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02176 ATGCTTGCAGTGAACTCACTTATTTATAGTGATACCGGTTCATCATTAGAGGTGTACGTACGGTACATATTTGGACACGGCGGTTATGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAAGGAAGTGAAAGCATATTTGAAGAAAGGTGTTGCAGTGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGTGTCGAAAAAGCGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTATTACAAGAAATGTAGCAATGAGTTGAATGAGGTTGCACTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGATATGGAAGAATGCTCAACCATTCATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGATGAGAAAAGTTTGTGCTCAGTTCAGAATATTGAAGATTATGATATCACGTTTACTTACTGTTATTGTCCTCAGTTTGATGTATTTTCTTTACTGTTGTATCCTTTTATTTTGAATAAAGGGTCTTGTTTTGGCCCCTTGTATTACATGAATTTTGTTGGTAAGGAGGATGGTGATGTTGTGGCGATGGAGGGAGAGGCGTTTGGCCACTTCAACCGTTGA 789 0.4157 MLAVNSLIYSDTGSSLEVYVRYIFGHGGYGSENGDTVNYATVVKEVKAYLKKGVAVKELQSHIAAFPVSAQEKMNALLEGLFDGVEKAFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFYYKKCSNELNEVALILKALYDVDLVEEEHVVHWYSKGLKGDKKDSQIWKNAQPFIDWLRNAESESEEDEKSLCSVQNIEDYDITFTYCYCPQFDVFSLLLYPFILNKGSCFGPLYYMNFVGKEDGDVVAMEGEAFGHFNR 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02176 262 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 39 189 IPR045196 GO:0003743|GO:0006413
Arst3g02176 262 SMART 542_3 98 186 IPR003307 GO:0005515
Arst3g02176 262 CDD W2_eIF5 42 183 - -
Arst3g02176 262 Pfam eIF4-gamma/eIF5/eIF2-epsilon 112 190 IPR003307 GO:0005515
Arst3g02176 262 ProSiteProfiles W2 domain profile. 32 190 IPR003307 GO:0005515
Arst3g02176 262 Gene3D - 35 201 - -
Arst3g02176 262 SUPERFAMILY ARM repeat 38 184 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02176 Arst-Chr3 27136231 27137940 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02176 42 183 Eukaryotic Initiation Factors Gene Family AT1G77840 49.650 1.76e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02176 K03262 - ahf:112778866 294.664