Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02170 ATGGCAGATGATCAATTTCGAGCAAGTGCAAATTGGTGGGATTCATCAAGAAACGTTGTGAGGTTTGAAAGCCGGGAACCGCAATCTGGATCCTCTGGCCTCACCAACAACACGGGAAATTTTTCTTGGCATGGCGTTGGTGATGATAAAATAATGAAGCTACCAAGATCTTCCACCATGGAAAATTCCATGTCTTCTTCTTCTGCAGGCGCCTCATCAGGAAGGTCCTGTGTGGTGTTCCATGAGAGGTTTCAACAACAACAAAACTTGGATATGATGATGGGTTTGGGGCTTTCTTCTCAAGCATCCACGGATTGGAATCAAGCATCTTTCATGAGAGCAGAAAAGGCATCCGAGATGTTGCAACAGAATTTGAGCGCTCATCAAGAAATACAGTTCAGTCCTCAATACAGCAACATCACAAGCCAACAAGTATTATCCTCTAATTTTCAGATGGATTCTTCTTCTTCAGCGCCTTTATATTGTAACACTTCAATGCTACAAGGGCTATTAGGACCTGAAAGCAATAATCAACCACACCAAGGGCCTATGAGTAATTTTCCATACTCAACGTGTTTGAACAGCAACAATAATAACAACCAATTGCATTTCACTAATAACGCCCCGTTCTGGAACGCTTCGGAGCCTGCGGCGGTTTCCATTAAAGATGGTCGATCCATCTTCTTCCCTTCATTGCACCAACCATTTTCGGCGCCAAAGAATATATGTGAAGTAAGGGAGTCAGGAGGTAGCATGTTGAAGAAAAGTGAGAATGAGCAATCATCAAAAAGGCCTAGAAACGAAACACCTCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAATCACTGCCCTACAGCAATTGGTTTCGCCTTTCGGAAAGACTGATACGGCATCGGTGCTCTCTGAGGCCACTGAATACATCAAATTCCTCCATGAGCAAGTGACTGTTTTAAGCACCCCATATATGAAGAGTGGAGCTCAAACACAGCATCACCAGAATTCTGGTAAATCAAAGGAAGCTGATGGACCAAAACAGGATCTAAGAAGCCGAGGGCTGTGTCTGGTGCCAATTTCAAGTACATTTCCAGTGACTCATGAACCCACAGTTGATTTTTGGACGCCAACATTTGGAGGAACTTATAGATAA 1167 0.4362 MADDQFRASANWWDSSRNVVRFESREPQSGSSGLTNNTGNFSWHGVGDDKIMKLPRSSTMENSMSSSSAGASSGRSCVVFHERFQQQQNLDMMMGLGLSSQASTDWNQASFMRAEKASEMLQQNLSAHQEIQFSPQYSNITSQQVLSSNFQMDSSSSAPLYCNTSMLQGLLGPESNNQPHQGPMSNFPYSTCLNSNNNNNQLHFTNNAPFWNASEPAAVSIKDGRSIFFPSLHQPFSAPKNICEVRESGGSMLKKSENEQSSKRPRNETPPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEATEYIKFLHEQVTVLSTPYMKSGAQTQHHQNSGKSKEADGPKQDLRSRGLCLVPISSTFPVTHEPTVDFWTPTFGGTYR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02170 388 MobiDBLite consensus disorder prediction 24 48 - -
Arst3g02170 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 334 IPR036638 GO:0046983
Arst3g02170 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 317 IPR011598 GO:0046983
Arst3g02170 388 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 122 369 - -
Arst3g02170 388 CDD bHLH_AtbHLH_like 274 325 IPR045239 -
Arst3g02170 388 MobiDBLite consensus disorder prediction 331 353 - -
Arst3g02170 388 FunFam Transcription factor bHLH123 family 278 340 - -
Arst3g02170 388 MobiDBLite consensus disorder prediction 251 277 - -
Arst3g02170 388 MobiDBLite consensus disorder prediction 24 43 - -
Arst3g02170 388 Gene3D - 278 341 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02170 Arst-Chr3 27103514 27107302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02170 202 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 57.789 2.72e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02170 - - adu:107478336 759.214