Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02112 ATGTTGTTTGGGACCATCGGAAGCATTGGTGATGGATTGCAGAACCCTCTTATGATGTATATTCTTAGTGATGTTATCAATGCTTATGGAGACAAGAATACCAAATTGGGTATGCATGATGTGAACAAGTATGCATTGAGGCTTTTATTAGTTGCAATTGGTGTTGGACTTTCAGCTTTTGTAGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAGGCTTCAAGAATGAGAATGGAATATTTGAAATCAGTGCTGAGACAAGAAATTGGATTCTTTGATAGCCAGACAGCTGGTACTTCAACAACTTACCAAGTTGTCTCACTCATCTCCTCAGATGCCAATACCATCCAAGTTGCCTTGTGTGAGAAGATACCAGACTGCTTGACATACATGTCAACATTCTTTTTCTGCCACATCTTTGCATTTGTGCTTTCATGGAGACTCACACTTGCAGCCATACCACTCTCCCTCATGTTCATAGTCCCAGCTCTCATGTTTGGGAAGATGATGTTGGATGTGACAATGAAAATGATTGAGTCTTATGGTGTTGCTGGTGGGATTGCAGAGCAAGCAATATCTTCAATAAGAACTGTTTATTCCTATGTTGGGGAAAACCAAACTCTGAACAAATTCAGCAGTGCCCTTCAGAAAACCATGGAGTTAGGAATAAAGCAAGGTTTTGCAAAAGGGTTGATGTTAGGGAGCATGGGAGTTATTTATATAAGTTGGGGTTTTCAGGCTTGGGTTGGAACCATTCTTATCACTGAAAAAGGAGAAAAGGGTGGTCATGTTTTTGTGGCTGGCTTCAATGTACTCATGGGAGGGCTGAGCATTTTAAGTGCACTTCCAAATTTAACTGCCATAACAGAAGCAACTACTGCCGTCACTCGCCTTTTCGAAATGATTGATAGGGTACCATCCATAGATTCTGAAGACAAAAAGGGGAAGGCCTTGTCATATGTTAGAGGAGAAATTGAATTCAGGAACATATACTTCAATTATCCATCAAGACCAGACACACCAATCTTACAAGGACTCAATCTCACTTTTCCAGCAGGCAAGAGAGTAGGCCTTGTTGGTGGTAGTGGTTCTGGAAAATCAACAATCATTGCACTTCTTGAGAGGTTCTATGACCCTATTGAGGGAGAAATACTATTGGATGGTCACAAGATTAGTAGACTTCAGTTGAAATGGTTTAGATCCCAATTTGGCCTAGTGAATCAAGAGCCTGTTCTTTTTGCTACATCAATTAAAGAGAATATATTGTTTGGAAAAGAAGGGGCTTCAATGGAAAATGTGATAAGTGCAGCTAAGTCAGCAAATGCACATGATTTCATTGTTCAGTTGCCAGATGGTTATGAAACTCAAGTTGGACAGTTTGGATTTCAATTATCCGGCGGACAGAAGCAGCGAATCGCCATAGCAAGAGCATTACTTAGAGATCCAAAGATTCTCCTGCTTGATGAAGCAACCAGTGCTCTGGATGCACAATCCGAAAGGGTAGTACAGGCTGCAATAGATCAAGTTTCAAAAGGAAGGACAACAATCATCATCGCACACCGTTTATCGACGATACAAACGGCCGACCTCATTGCTGTCCTTCAAGAAGGCAGAGTGATTGAATTAGGCACCCATAATGAGCTGATGGACTTGAATGACGGACAAGGCGGAGCCTACGCCCGAATGGTAGAGTTGCAGCAAGTAACAGCTCAGAATGATGAACCAAGGCCTAGTTCCAATGCTCCCAAGGAGCGAAGGAGCACACAAAGGATCAGCACTCCTCAAAGCCCTTCAGTGAGTTTCACATCAAGCACACATGGCACTCCAATGTTCACTCCCTTCAGTCAGGGACTTTCCATGGGAACTCCTTACTCCTACACAGTTCAATATGATCTGGATGATGATAGTTTCGAAGATAACCCGAAACGATTGCATCATCCGGCTCCGTCACAGTGGCAATTGCTAAAGTTAAGTGCTCCTGAGTGGGGTAGAGCATTGCTTGGACTCTTGGGAGCGTTGGGCTCTGGAGCAGTTCAACCAATAAATGCATACTGTGTTGGATTGCTAATATCTATCTACTTTGACACTGATAACATGAAGTCCAAGACTCGACGCCTGGCCCTGGTTTTCTTAGGAATCGGTGTCTTTAACTTCTTCACAAGCATCCTCCAACACTACAATTTCGCAGTCATGGGCGAAAGGTTGACTCGAAGAATCCGCGAGAAGCTTCTAGAAAAACTGATGACATTTGAGATAGGATGGTATGACCAGGAAGAGAACACCAGCGCGGCGATCTGCGCAAGACTATCTTCCGAAGCCAACTTGGTTCGATCACTGGTAGGCGATCGGATGTCATTGTTATCACAGGCATTATTTGGTTCTCTGTTTGCGTATGCTCTAGGACTCGTGCTGACGTGGAAGCTGTCCCTTGTGATGATTGCAGTGCAGCCAATTGTCATCGGAAGCTTCTATGCAAGGAGTGTTTTAATGAAAAGCATGGCTGAAAAGGTGCGAAAGTCACAACGAGAAGGAAGCCAGCTGGCAAGTGAGGCAGTTATAAACCACAGAACAATAACCGCCTTCAGTTCTCAGAAGAGAATGATGTCACTCTTCCAATCCACTATGTTAGGCCCTAAGCAAGAGAGCATTAGGCATTCTTGGATTTCGGGTTTCGGCCTTTTCAGCTCCCAATTCTTCAACACTGCTTCCACAGCTTTAGCATACTGGTATGGTGGGAGGCTCCTTGTGAATGGTGACATTACTCCCAAGCATCTGTTCCAAGCCTTCTTGATATTGCTCTTCACTGCTTACATCATTGCAGAGGCTGGAAGCATGACAAATGACATATCTAAAGGAAACAGTGCAGTCGGATCGGTTTTCGCCATCTTGGACCGGAAAAGCGAGATTGATCCTGAGACATCATGGGGGTCAGATAAAAGAAGGAAGATTAGGGGTAAAGTTGAGCTTAAGAGTGTGTTCTTTGCATATCCAACTAGGCCTGATCAAATGATATTTAAGGGTTTGTGTCTCACAGTTGAAGCTGGGAGAACAGTGGCACTAGTAGGGCATAGTGGGAGTGGCAAATCCACCATTATTGGTCTTGTTGAGAGATTTTATGATCCTTTGAAGGGAAGTGTGTGTATAGATGAACAAGATATTGTGTCATATAATTTGAGAATGCTGAGGTCACATATTGCATTGGTGAGTCAAGAGCCAACACTTTTTGCTGGAACCATTAGAGAAAATATTGCTTATGGAAAAGAAGAGGCTACTGAATCTGAGATAAGAAGGGCTGCAGCTATGGCTAATGCTCATGAATTCATAAGTGGAATGAAAGATGGGTATGAGACATATTGTGGAGAAAGAGGGGTTCAACTCTCAGGAGGGCAGAAACAAAGAGTAGCATTAGCAAGGGCCATACTAAAGAATCCAGCAATATTGCTTCTTGATGAGGCTACAAGTGCATTGGACAGTGTGTCAGAGAATTTGGTCCAAGAAGCACTTGAGAAGATGATGGTTGGACGAACATGCATTGTTGTGGCACATAGGCTATCTACAATACAAAGATCCAACTCCATTGCTGTCATTAAGGGTGGCAAGGTTGTGGAACAAGGTTCACATAATGAGTTAATTTCCCTTCATGGGGCATACTATTCTCTTATTAAACATCAAAATGCTAACTCCTCTCGATAA 3696 0.4318 MLFGTIGSIGDGLQNPLMMYILSDVINAYGDKNTKLGMHDVNKYALRLLLVAIGVGLSAFVEGMCWARTAERQASRMRMEYLKSVLRQEIGFFDSQTAGTSTTYQVVSLISSDANTIQVALCEKIPDCLTYMSTFFFCHIFAFVLSWRLTLAAIPLSLMFIVPALMFGKMMLDVTMKMIESYGVAGGIAEQAISSIRTVYSYVGENQTLNKFSSALQKTMELGIKQGFAKGLMLGSMGVIYISWGFQAWVGTILITEKGEKGGHVFVAGFNVLMGGLSILSALPNLTAITEATTAVTRLFEMIDRVPSIDSEDKKGKALSYVRGEIEFRNIYFNYPSRPDTPILQGLNLTFPAGKRVGLVGGSGSGKSTIIALLERFYDPIEGEILLDGHKISRLQLKWFRSQFGLVNQEPVLFATSIKENILFGKEGASMENVISAAKSANAHDFIVQLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKILLLDEATSALDAQSERVVQAAIDQVSKGRTTIIIAHRLSTIQTADLIAVLQEGRVIELGTHNELMDLNDGQGGAYARMVELQQVTAQNDEPRPSSNAPKERRSTQRISTPQSPSVSFTSSTHGTPMFTPFSQGLSMGTPYSYTVQYDLDDDSFEDNPKRLHHPAPSQWQLLKLSAPEWGRALLGLLGALGSGAVQPINAYCVGLLISIYFDTDNMKSKTRRLALVFLGIGVFNFFTSILQHYNFAVMGERLTRRIREKLLEKLMTFEIGWYDQEENTSAAICARLSSEANLVRSLVGDRMSLLSQALFGSLFAYALGLVLTWKLSLVMIAVQPIVIGSFYARSVLMKSMAEKVRKSQREGSQLASEAVINHRTITAFSSQKRMMSLFQSTMLGPKQESIRHSWISGFGLFSSQFFNTASTALAYWYGGRLLVNGDITPKHLFQAFLILLFTAYIIAEAGSMTNDISKGNSAVGSVFAILDRKSEIDPETSWGSDKRRKIRGKVELKSVFFAYPTRPDQMIFKGLCLTVEAGRTVALVGHSGSGKSTIIGLVERFYDPLKGSVCIDEQDIVSYNLRMLRSHIALVSQEPTLFAGTIRENIAYGKEEATESEIRRAAAMANAHEFISGMKDGYETYCGERGVQLSGGQKQRVALARAILKNPAILLLDEATSALDSVSENLVQEALEKMMVGRTCIVVAHRLSTIQRSNSIAVIKGGKVVEQGSHNELISLHGAYYSLIKHQNANSSR 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02112 1231 Pfam ABC transporter 1007 1155 IPR003439 GO:0005524
Arst3g02112 1231 SUPERFAMILY ABC transporter transmembrane region 1 310 IPR036640 GO:0005524|GO:0016020
Arst3g02112 1231 Gene3D ABC transporter type 1, transmembrane domain 628 975 IPR036640 GO:0005524|GO:0016020
Arst3g02112 1231 ProSitePatterns ABC transporters family signature. 465 479 IPR017871 GO:0005524|GO:0016887
Arst3g02112 1231 Gene3D - 978 1231 IPR027417 -
Arst3g02112 1231 FunFam ABC transporter B family member 15-like 1 323 - -
Arst3g02112 1231 ProSitePatterns ABC transporters family signature. 1127 1141 IPR017871 GO:0005524|GO:0016887
Arst3g02112 1231 Pfam ABC transporter 344 493 IPR003439 GO:0005524
Arst3g02112 1231 PANTHER ABC TRANSPORTER B FAMILY 1 723 IPR039421 -
Arst3g02112 1231 PANTHER ABC TRANSPORTER B FAMILY 1 723 IPR039421 -
Arst3g02112 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 326 562 IPR003439 GO:0005524
Arst3g02112 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 291 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g02112 1231 SMART AAA_5 353 545 IPR003593 GO:0016887
Arst3g02112 1231 SMART AAA_5 1015 1207 IPR003593 GO:0016887
Arst3g02112 1231 FunFam ABC transporter B family member 19 316 568 - -
Arst3g02112 1231 Gene3D ABC transporter type 1, transmembrane domain 1 581 IPR036640 GO:0005524|GO:0016020
Arst3g02112 1231 Gene3D ABC transporter type 1, transmembrane domain 1 581 IPR036640 GO:0005524|GO:0016020
Arst3g02112 1231 Gene3D - 316 568 IPR027417 -
Arst3g02112 1231 FunFam Putative ABC transporter B family member 8 631 975 - -
Arst3g02112 1231 Gene3D - 316 568 IPR027417 -
Arst3g02112 1231 CDD ABC_MTABC3_MDL1_MDL2 326 567 - -
Arst3g02112 1231 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 988 1224 IPR003439 GO:0005524
Arst3g02112 1231 MobiDBLite consensus disorder prediction 585 609 - -
Arst3g02112 1231 CDD ABC_6TM_Pgp_ABCB1_D2_like 679 970 - -
Arst3g02112 1231 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 299 - -
Arst3g02112 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 567 IPR027417 -
Arst3g02112 1231 Pfam ABC transporter transmembrane region 668 937 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g02112 1231 Pfam ABC transporter transmembrane region 1 276 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g02112 1231 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 667 952 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst3g02112 1231 FunFam ABC transporter B family member 4 978 1230 - -
Arst3g02112 1231 CDD ABC_MTABC3_MDL1_MDL2 988 1225 - -
Arst3g02112 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 983 1225 IPR027417 -
Arst3g02112 1231 SUPERFAMILY ABC transporter transmembrane region 655 971 IPR036640 GO:0005524|GO:0016020
Arst3g02112 1231 MobiDBLite consensus disorder prediction 570 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02112 Arst-Chr3 25774572 25785740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02112 2 570 Calmodulin-binding Proteins AT2G36910 36.364 1.63e-101 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02112 K05658 - gmx:100788127 2080.83