LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst3g02109	ATGGCTTCCACAGCCTCTCCAAGAATACCTACCGAGACGGTGAAGAACGCCGTGGAGGCTCTCCTGAAGTGGCGAGATTCCAATTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCGTTTACTTAGTCGTCACTCTGAAAACCATCCCTCACAAATCCCGTGTTAACCCTTACAAGGTCCCTTTACCCCACTCTCTCCTCTCCCCCTTCAACGAGACTTGCCTCATCATCGACGACAGGCCCATATCCAAACTCACTAAACAAGAAGCTCAAAATAAGATCAAGGCCGATAACGTTGCCGTTTCCAGGGTCCTCAGGTTGTCGAAGCTGGCCTCCGATTACTGCCCTTTCGAGGCAAAGCGGAAGCTCTGTGATTCATATGATCTTTTTTTCGCTGATAAAAGAGTGGTGCCTTTGATGCCCAGGCTGTTGGGGAAGAAATTCTTCAAGAAGAAGAAGGTGCTGGTGCAGGTGGACTTGACTAAGAAGAATTGGAAGGAGCAGGTGGATAAGGCGTGTTCGTCGGTGCTTCTGTTTCTTGGAACGGGGACTTGTTATGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGCGAGCAAAATGTTGAGAATATGATGGCTGTCATTGAGGGGGTTGTTGAGGTTGTGCCGAAGAAGTGGGCGAATGTGAGGTCCTTGCATGTTAAGCTTTACGAGTCGCTGGCGCTGCCTGTTTTCCAGGCTATTCCGGAGGTGAAGTTGAGGATTGAGGGTAGTAAGGTTGAGGAGGCAGAGAAAGAGAAGCAGACGATAAAGGAGGAGGAAGAGGGCGAAGACGATAGTGGCGCGAAGGCGGTGAAGAAGAAGAAGAAGAAGGGGAGGATTCATGAAGTTAGATACATGGATAGCGAAGTTGGTGAGGATAATGTTGAAGATGTGGCAGGTAGTGAGGATGATGGTGGTGGTGTTATTATGGAGAAAGATTTAAAGGATGCTGGAAAAGGTAGTGGAGAATTGGCGAATAAGAAGAGGAAGAAAGGGGCATTGAGTGAGTTGAGTAGTGTCAAAGAATTGAAAAAATATGTTAAGAAAAGTGGTAAACAGGATAAATCTGCGAAAGTGATGAAGGAAAATTCCATCAAGAAGAGTCAGAATAGTGAATTATCTGTTGAGGATGGAGATTTTGGAAAGAAGGGGAAGAATATCAAGAAGAAACTATCTCTATTGAAGTCAGAAGAAGCTGATTTGAAAAAGAAAGTGAGGGCCAAGAAAAGTGATGATACTTTATAG	1278	0.4585	MASTASPRIPTETVKNAVEALLKWRDSNSESHKPKLFDADEEFVYLVVTLKTIPHKSRVNPYKVPLPHSLLSPFNETCLIIDDRPISKLTKQEAQNKIKADNVAVSRVLRLSKLASDYCPFEAKRKLCDSYDLFFADKRVVPLMPRLLGKKFFKKKKVLVQVDLTKKNWKEQVDKACSSVLLFLGTGTCYVVKVAKVSMESEQNVENMMAVIEGVVEVVPKKWANVRSLHVKLYESLALPVFQAIPEVKLRIEGSKVEEAEKEKQTIKEEEEGEDDSGAKAVKKKKKKGRIHEVRYMDSEVGEDNVEDVAGSEDDGGGVIMEKDLKDAGKGSGELANKKRKKGALSELSSVKELKKYVKKSGKQDKSAKVMKENSIKKSQNSELSVEDGDFGKKGKNIKKKLSLLKSEEADLKKKVRAKKSDDTL	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst3g02109	425	MobiDBLite	consensus disorder prediction	356	373	-	-
	Arst3g02109	425	CDD	Ribosomal_L1	14	241	IPR028364	-
	Arst3g02109	425	FunFam	Ribosomal protein L1p/L10e family	87	178	-	-
	Arst3g02109	425	MobiDBLite	consensus disorder prediction	356	395	-	-
	Arst3g02109	425	MobiDBLite	consensus disorder prediction	317	344	-	-
	Arst3g02109	425	Gene3D	-	85	180	IPR016095	-
	Arst3g02109	425	Pfam	Ribosomal protein L1p/L10e family	34	236	IPR028364	-
	Arst3g02109	425	Coils	Coil	250	277	-	-
	Arst3g02109	425	MobiDBLite	consensus disorder prediction	302	344	-	-
	Arst3g02109	425	PANTHER	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	17	236	-	-
	Arst3g02109	425	MobiDBLite	consensus disorder prediction	259	282	-	-
	Arst3g02109	425	SUPERFAMILY	Ribosomal protein L1	12	242	IPR023674	-
	Arst3g02109	425	MobiDBLite	consensus disorder prediction	259	285	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst3g02109	Arst-Chr3	25751050	25753868	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst3g02109	130	232	Cytoplasmic Ribosomal Protein Gene Family	AT2G27530	31.068	1.47e-07	50.1