Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02076 ATGAGCAACAATTATTTCATGCCTTTGCCTGGGTCTCGCAGAACAAGTAGTGATACAAGAGCATTTAATGTTTACACTTTTGATAATACTGATTCCAATGACGTGCCTGTGTATTACAGATCTCGCTCTAACCATAACACTGGTAACAGGAATTCAGGTGTGATAGATCCAAGGAGGGTGTGGGAAAGCAGAAGTCCATCATCAGGACGCCACACTGCTCCAAATTTTGAAGCACAACCAAATAACAGGCAACAATTTCATTTTAATAATGGCGAGATAGGAAGGGGCTCAAACCCTAGGTTCAGAGATATTTTTCGGCAATCACCGCCACGAACCGCAACAACCAGAGAGATTCCCCCACAAGTAGAAAATTCTGAGTCAATGGCTCTTAGCAAGCTCAAGAAAGAAGTCTACAACCCCGTGCCAAAGCGGCTAGCCCGGAGGCTCAGCCTATACTACAGAGGCGACAACAACAACGGGTCAAATGGTGTTCGAGAAAGGGAGAAAGACAAGGATGAAGAAGGTAAGAGTTGTGCTGTTTGCTTGGAAGATTTTGAGGCAAAAGAAGAAGTTATGGTGACACCATGTAACCACATGTTCCATGAGGAATGCATAGTGCCTTGGGTAACAAGCAAAGGACAGTGCCCAGTTTGTAGGTTTGTGATAATTGAGAGAGTTAGAGGGAACCTTTACCCTTCTTCATTCAATAGCAGTAACATTGCAAATATGGAACCAAGTGAACTAATTGCTGGTGAGCTTTTGTCAATTTTGAGCGCCATGGAAGAAGCTTTTCAGTTGGGGAATGGAATGTACTAG 816 0.4363 MSNNYFMPLPGSRRTSSDTRAFNVYTFDNTDSNDVPVYYRSRSNHNTGNRNSGVIDPRRVWESRSPSSGRHTAPNFEAQPNNRQQFHFNNGEIGRGSNPRFRDIFRQSPPRTATTREIPPQVENSESMALSKLKKEVYNPVPKRLARRLSLYYRGDNNNGSNGVREREKDKDEEGKSCAVCLEDFEAKEEVMVTPCNHMFHEECIVPWVTSKGQCPVCRFVIIERVRGNLYPSSFNSSNIANMEPSELIAGELLSILSAMEEAFQLGNGMY 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02076 271 CDD RING-H2_SIS3 176 222 - -
Arst3g02076 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 229 IPR013083 -
Arst3g02076 271 MobiDBLite consensus disorder prediction 60 116 - -
Arst3g02076 271 SMART ringv_2 177 219 IPR011016 GO:0008270
Arst3g02076 271 SMART ring_2 178 218 IPR001841 -
Arst3g02076 271 FunFam RING/U-box superfamily protein 162 236 - -
Arst3g02076 271 MobiDBLite consensus disorder prediction 66 92 - -
Arst3g02076 271 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 49 220 - -
Arst3g02076 271 Pfam Ring finger domain 177 219 IPR001841 -
Arst3g02076 271 SUPERFAMILY RING/U-box 168 225 - -
Arst3g02076 271 ProSiteProfiles Zinc finger RING-type profile. 178 219 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02076 Arst-Chr3 25156115 25158947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02076 124 268 C3H Transcription Factor Family AT3G58720 51.370 2.54e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02076 - - gmx:100802085 280.411