Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02064 ATGATGTCAAGGTCGTATACAAATCTCTTAGATTTGGCTTCTGGGAATTTCCCGGCAATGGGGAATTCGTTTAAAGAACGGCGGCGGATGCCAAGGGTTATGAGTGTACCTGGGATTGTCACAGAAGTAGATGATGATCAGGCAGTTAGTGTTTCTTCTGATAACCCGTCAACTATTTCTACAGATAGAATGATCATTGTAGCAAATCAGCTACCTTTAAAAGCAAAGCGACGAGAGGACAACCAAGGTTGGAATTTCAGTTGGAATGAGGATTCCTTGCTTTTACAACTCAAGGATGGACTTCCAGAAGAGATGGAGGTTCTTTATGTTGGATCATTGCGTGTTGACATTGACCCAGCTGAGCAGGATGATGTGTCACAGTATTTGTTGGATAAATTCAAATGTGTTCCTACTTTTCTACCCTCTGATGTTTTGGCAAAGTTTTATGATGGCTTCTGTAAAAGGCAGTTATGGCCACTTTTTCATTACATGTTACCATTTTCAACCGCTAAGAGCCACCGTTTTGATCGATCTTTATGGGAAGCCTATGTGCTAGCAAATAAGCTATTTTTTCAAAAGGTAGTTGAAATAATAAACCCAGAAGATGATTTTATTTGGGTTCATGATTATCATTTGATGGTGCTGCCAACCTTTATAAGAAGGCGCTTTAACAGGGTTAAACTGGGATTTTTCCTGCATAGTCCCTTTCCTTCATCAGAGATATATAGGACTCTTCCTGTCAGGGAGGAGATACTTAAAGCATTACTCAACTCTGATATCATTGGATTCCACACGTTTGACTATGCTCGTCATTTCCTTTCTTGCTGTAGTCGTATGCTGGGTCTGGAGTATCAGTCAAAGAGGGGATATCTAGGATTGGAATATTATGGAAGGACTATCAGTATTAAGATTATGCCTGTAGGAATTCACATGGGTCGAATTGAAACCGTTATGAAGATGGCAGATGAGGAGTGCAAGGCAAGGGAGCTCAAACAGCAATTTGAAGGGAAAACTATTTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGAATTAATTTGAAGATTTTGGCTATGGAGCAAATGCTCAAACAACACCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGGTTGTAAATCCTGCAAGGGGAAAAGGGATACATCTAGATGAGATACGTGCTGAAATAGAAGAAAGCTGCAGCAGGATTAACAGAATGTATGGACGGCCTGGTTATGAACCAATTATTTTTATTGATAGATCAGTTTCAGTTGCTGAAAAGGTTGCCTATTACAGCCTTGCTGAGTGTGTTATTGTCACAGCTGTGAGAGATGGGATGAATCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGGTAATGGTTCATGTTCCGATATTACAAGCCCAAAGAAGAGTATGTTAGTAATATCAGAATTTATTGGGTGTTCTCCATCACTCAGTGGGGCTATACGTGTCAATCCATGGAATGTTGAGGCCACTGCAGAGGCAATGAACGAGGCTATCTCAATGAGTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCACTACCGGTATGTTAGCACACATGATGTAGCATATTGGTCACGTAGTTTCTTGCAGGACATGGAGAGGGCTTGCGCTGACCTTCTAAGAAAAAGATGTTGGGGAATTGGTCTTAGTTTTGGATTTAGAGTTGTAGCACTTGACCCAAATTTTCGTAAGCTCTCAATTGATGCTATGGTTTCATCTTACAAGAGGGCAAGGAGTAGGGCCATTTTGTTGGACTATGATGGTACGGTGATGCCACAGAATTCCATTAATAAGAGTCCAAGCAATGAGGTTATCTCTCTTTTGGACACGCTTTGTGCGGACCCGAGAAATGTAGTTTTCATTGTTAGCGGGAGGGGGAGGAATAGCTTAAGTGATTGGTTCTTACCCTGCAAAAATCTGGGAATTGCCGCAGAACATGGTTACTTTTTGAGATGGTCGCAAAGTGCACAATGGGAAATTTGTGGTAAGAACATGGACTTTGGATGGATGCAGATTGCTGAACCCGTGATGAAACTCTACACAGAGGCAACTGATGGTTCCAACATTGAAACAAAGGAAAGTGCTTTGGTCTGGCAATACCGGGACGCAGATCTTGGTTTCGGATCTTCTCAAGCTAAGGAAATGTTGGATCATCTAGAAAGTGTTTTAGCCAATGAGCCCGTTGCCGTGAAGAGTGGCCAGTTCATTGTTGAAGTAAAACCCCAGGATGTGAGCAAAGGCTTAGTTGCCGAAAGGATATTTTCATCAATGGCAGAGAATGGCAAACAGGCTGATTTTGTGTTGTGTGTTGGTGATGATAGATCAGATGAAGACATGTTTGAAATAATCAGTAGTTCAATCTCAAGAAATATTCTTTCAGCCAATTCTTCTGTATTTGCCTGCACAGTTGGACAAAAACCAAGCAAAGCTAAGTATTATCTGGATGATACTACTGAAGTAATAAGCATGCTTGAATCTTTGGCAGAAGAATCAGATTCTTCACCCGACTTAGAAGAAATTGGAGATTCTTTTCAAAGGCAAGTGAGATTATCATCCTGA 2598 0.4111 MMSRSYTNLLDLASGNFPAMGNSFKERRRMPRVMSVPGIVTEVDDDQAVSVSSDNPSTISTDRMIIVANQLPLKAKRREDNQGWNFSWNEDSLLLQLKDGLPEEMEVLYVGSLRVDIDPAEQDDVSQYLLDKFKCVPTFLPSDVLAKFYDGFCKRQLWPLFHYMLPFSTAKSHRFDRSLWEAYVLANKLFFQKVVEIINPEDDFIWVHDYHLMVLPTFIRRRFNRVKLGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIETVMKMADEECKARELKQQFEGKTILLGVDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQVVNPARGKGIHLDEIRAEIEESCSRINRMYGRPGYEPIIFIDRSVSVAEKVAYYSLAECVIVTAVRDGMNLTPYEYIACRQGISGNGSCSDITSPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACADLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSSYKRARSRAILLDYDGTVMPQNSINKSPSNEVISLLDTLCADPRNVVFIVSGRGRNSLSDWFLPCKNLGIAAEHGYFLRWSQSAQWEICGKNMDFGWMQIAEPVMKLYTEATDGSNIETKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMAENGKQADFVLCVGDDRSDEDMFEIISSSISRNILSANSSVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSSPDLEEIGDSFQRQVRLSS 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02064 865 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 549 - -
Arst3g02064 865 NCBIfam HAD-IIB family hydrolase 595 797 IPR006379 -
Arst3g02064 865 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Arst3g02064 865 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 852 - -
Arst3g02064 865 Gene3D Glycogen Phosphorylase B; 317 530 - -
Arst3g02064 865 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Arst3g02064 865 Gene3D Glycogen Phosphorylase B; 56 316 - -
Arst3g02064 865 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Arst3g02064 865 Gene3D - 592 695 IPR023214 -
Arst3g02064 865 Gene3D - 721 852 IPR023214 -
Arst3g02064 865 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Arst3g02064 865 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Arst3g02064 865 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Arst3g02064 865 SUPERFAMILY HAD-like 593 841 IPR036412 -
Arst3g02064 865 CDD HAD_TPP 594 833 - -
Arst3g02064 865 NCBIfam trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Arst3g02064 865 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Arst3g02064 865 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 842 IPR001830 GO:0003824|GO:0005992
Arst3g02064 865 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 842 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02064 Arst-Chr3 24971976 24976451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02064 1 847 Trehalose Biosynthesis Gene Families AT1G06410 77.332 0.0 1381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02064 K16055 - gmx:100800847 1573.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02064 3 24971976 24976451 Arst3g02064 3 24971976 24976451 ECH