Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02027 ATGGAGGAGACACAAGAAGATGCAGGGCAGGCAACGCAAAGGCCATCCAGCATGTCAGCGTGGCCTTCAGATTTTGCTGGAAAATTTGGATCTGTTTCTTTGGATTCTCAAGAAACCTTAAATGATAGTGACTCACATAGACATTCTAATGAAGATGTCATGTCACCACATAAAGCATCACAGATTCTCTGGCACACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTCAATAAATATTTCGATGATATTCCTACTTTGGATGAGCTTCAGGCTTTGAGTATAGATGGTTTTAAGGCTGATATCATTCTTGTGGACACAGAGAAAGATAGAAAGTTATCCATGTTGAAGCAACTAATTGTGACATTGGTCAAAGGATTGAACTCAAATCCAGCTGCAACGATTAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGACCAAATGCAGAAAGTCCCGCAAAAGCTGCACTAGAGGAGCCCTCCCATGTGTTTGAAAATTGTGGTGTCCAGTTGCTGGGGCAGATAAGGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGACACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTCCCAAATGATGAAGCTGCTGAATGTATAGACTCTTACAAGCATATGTCTGTGATGGTTGTATTAAATTCTGTGGAGCTGCTGGTTGATCTCATGCGTTTTCCTGGCCAATTGTTACCACGATCAACCAAGTCAATTTTTATGACACATATATCTGCAGCAGGAGAGAGTGATTCAGCCGAAAATGATTCTTGTGATTCACCATTGGAACCAAACAGTCCTTTGTATGGGGTTTCAGAGAGATCCAGCTATAGGTCAGATGGTGCATCATCTTCACAAGTTCGCAGGATACGAAGAAGTGTCAGTGTTACTCCTGAGATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAGCACTTAAGCAAACTCGTCGTCTAAGAGAACATGGGGATCATAGTTCTTTGTCCAATTCTCTGAATGATAGAACGAGTGGTCCAGATCTTCAGAGAAATCTGTCAAATTTCCATGGTCATGGTGACAGTTCTCAGAAAGCAATGTCATTACCGTCTTCACCGCATGACTATAGAGGACAAGCACCTGAGAGAGGTGGGCCATCTGGATATGGAGTGAATGCTAAACTGGAGTTGACTTGGAATAAAGTTCTCGAATCACAAATGTTCAACAATAAACCTCTGTTACCATTTGAAGAATGGAATATTGACTTCTCGGAATTAACCGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGCGAGGTTTTCCGTGGCATGTGGAACGGCACAAATGTTGCAATCAAGGTTTTTCTTGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAGATAAGCATTCTCAGCCGGCTGCGACATCCTAACGTTATTCTGTTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACGGAATATATGGAGGTGGGATCTTTGTATTTCTTGCTTCATATGAGTGATCAAAAGAAGAAGCTTAACTGGAAGAAAAGGTTAAAGATGTTGCGTGGCATATGCCGGGGCTTGATGCACATCCATCGTATGAAGATTATTCACCGTGATGTAAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTCTCAAGAATAGTGACAGAGACTCCCATGAGAGATTCTTCGTCAGCCGGAACTCCAGAGTGGATGGCTCCTGAACTCATTCGAAATGAACCATTCACTGAAAAATGTGACATCTTTAGTCTTGGGGTGATAATGTGGGAGCTCTGCACCTTGAGTAGGCCTTGGGAAGGTGTACCGCCAGAGAGGGTTGTTTATGCTGTAGCTCATGAGGGTTCCAGATTGGAACTTCCTGAAGGCCCAATGGGCAGGCTGATATCAGATTGTTGGGCAGAACCGCATGAGCGACCAAGTTGCGAGGAGATCCTCTCTCGTTTGGTAGACATTGAGTACTCAATGTCTTGA 2094 0.4269 MEETQEDAGQATQRPSSMSAWPSDFAGKFGSVSLDSQETLNDSDSHRHSNEDVMSPHKASQILWHTGMLSEPIPNGFYSVIPEKRLNKYFDDIPTLDELQALSIDGFKADIILVDTEKDRKLSMLKQLIVTLVKGLNSNPAATIKKIAGLVSDFYKRPNAESPAKAALEEPSHVFENCGVQLLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDEAAECIDSYKHMSVMVVLNSVELLVDLMRFPGQLLPRSTKSIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERSSYRSDGASSSQVRRIRRSVSVTPEIGDDIVRAVRAMNEALKQTRRLREHGDHSSLSNSLNDRTSGPDLQRNLSNFHGHGDSSQKAMSLPSSPHDYRGQAPERGGPSGYGVNAKLELTWNKVLESQMFNNKPLLPFEEWNIDFSELTVGTRVGIGFFGEVFRGMWNGTNVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEVGSLYFLLHMSDQKKKLNWKKRLKMLRGICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTETPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVAHEGSRLELPEGPMGRLISDCWAEPHERPSCEEILSRLVDIEYSMS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02027 697 MobiDBLite consensus disorder prediction 290 311 - -
Arst3g02027 697 SUPERFAMILY Protein kinase-like (PK-like) 416 689 IPR011009 -
Arst3g02027 697 CDD STKc_MAP3K-like 447 689 - -
Arst3g02027 697 MobiDBLite consensus disorder prediction 40 54 - -
Arst3g02027 697 ProSitePatterns Protein kinases ATP-binding region signature. 447 468 IPR017441 GO:0005524
Arst3g02027 697 MobiDBLite consensus disorder prediction 352 385 - -
Arst3g02027 697 Pfam Protein tyrosine and serine/threonine kinase 442 689 IPR001245 GO:0004672|GO:0006468
Arst3g02027 697 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 272 689 - -
Arst3g02027 697 SMART serkin_6 441 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02027 697 MobiDBLite consensus disorder prediction 271 311 - -
Arst3g02027 697 FunFam Serine/threonine-protein kinase isoform 1 432 519 - -
Arst3g02027 697 MobiDBLite consensus disorder prediction 35 54 - -
Arst3g02027 697 MobiDBLite consensus disorder prediction 339 403 - -
Arst3g02027 697 Gene3D Phosphorylase Kinase; domain 1 434 519 - -
Arst3g02027 697 Gene3D Transferase(Phosphotransferase) domain 1 520 696 - -
Arst3g02027 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 560 572 IPR008271 GO:0004672|GO:0006468
Arst3g02027 697 ProSiteProfiles Protein kinase domain profile. 441 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g02027 697 MobiDBLite consensus disorder prediction 1 30 - -
Arst3g02027 697 Pfam Ethylene-responsive protein kinase Le-CTR1 58 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02027 Arst-Chr3 24568904 24585141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02027 296 696 MAP Kinase Kinase Kinase AT3G58640 71.463 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Arst3g02027 PK_Tyr_Ser-Thr 5.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g02027 - - gmx:100810612 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02027 3 24568904 24585141 Arst3g02027 3 24568904 24585141 ECH
Arst8g02437 8 33759701 33840761 Arst3g02027 3 24568904 24585141 PCT