Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01996 ATGCGTCCACCGTTGAAGAGAGTCGATTTCCGTCCAGGCGACAAAGTGGAGGTTTGCAGTAAAGAAGAAGGCTTCCTGGGCTCATACTACGAGGCAACCGTTCTTTCCCGCCTCGAAACCGGCCGTTACGTCGCGAGGGACATCCGCCCTTCCCCTCCGAAGGTATATTCCCGCGGCGAGTTCTCTCTCTACCAGGCAGTTGATGCCTTCGACAACGACGGTTGGTGGTCCGGCGAGATCACCGGCAGGCTTGGTCCTCACCATTACTATGTTTATTTCCGTACAACCAATGAAGAGATCGCTTATCCTTCTAATAAGATTAGGGTTCATCATGAGTGGGTTAACGGCGACTGGATTCTCTCCCAAAGAGAGCAACCACAGCCACAGCCGCTGCAGAATCAGCAACAACAGCTAGGTCAACAATTCAATTGA 432 0.5231 MRPPLKRVDFRPGDKVEVCSKEEGFLGSYYEATVLSRLETGRYVVRYKTLLRDDAVSEPLTETLFPRDIRPSPPKVYSRGEFSLYQAVDAFDNDGWWSGEITGRLGPHHYYVYFRTTNEEIAYPSNKIRVHHEWVNGDWILSQREQPQPQPLQNQQQQLGQQFN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01996 164 Gene3D - 2 82 - -
Arst3g01996 164 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 145 - -
Arst3g01996 164 SMART agenet_At_2 80 136 IPR014002 -
Arst3g01996 164 SMART agenet_At_2 8 77 IPR014002 -
Arst3g01996 164 Pfam Agenet domain 13 74 IPR008395 -
Arst3g01996 164 CDD Tudor_Agenet_AtDUF_rpt2_4 88 130 - -
Arst3g01996 164 CDD Tudor_Agenet_AtDUF_rpt1_3 10 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01996 Arst-Chr3 24114231 24115520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01996 20 134 PHD Transcription Factor Family AT5G58610 30.370 2.62e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01996 - - adu:107478045 300.441