Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01995 ATGCGTCCACCAGTTAGGAGTAGGGTCAGGTTTCAAATAGGGCAGAAAGTGGAGGTGTGTGGTAAAGAAGAAGGGTTTTTTGGTTCTTATTATGAAGCCACCATTGTTTCATGCGTTGGTAATAGCTGCTACCTTGTCCAATATAAAAACCTTCTAAGTGCTACTGAGCCTAATAAGCCTCTCGTTGAGATGGTGAAACTTAAGGACCTTCGCCCTATTCCATCCGAAGATCTTGGATCTCATGAATTCATTGTTAATCAAAATGTTGATGTATTTGACAATGATGGTTGGTGGGTTGGAAAAATTACCAGTAAGAGGGGTTCCAGATATTCTGTGTATTTTTCCTCCACAAATGAAGAGATTGTTTATCCTTCTTCCCAAATTAGGGTTCACGTAGATTGGATTGATGGGTCGTGGGTATATCAGGATGGAAATCAACAATGA 444 0.4032 MRPPVRSRVRFQIGQKVEVCGKEEGFFGSYYEATIVSCVGNSCYLVQYKNLLSATEPNKPLVEMVKLKDLRPIPSEDLGSHEFIVNQNVDVFDNDGWWVGKITSKRGSRYSVYFSSTNEEIVYPSSQIRVHVDWIDGSWVYQDGNQQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01995 147 CDD Tudor_Agenet_AtDUF_rpt1_3 11 74 - -
Arst3g01995 147 Gene3D - 1 82 - -
Arst3g01995 147 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 140 - -
Arst3g01995 147 SMART agenet_At_2 81 136 IPR014002 -
Arst3g01995 147 SMART agenet_At_2 9 78 IPR014002 -
Arst3g01995 147 CDD Tudor_Agenet_AtDUF_rpt2_4 85 130 - -
Arst3g01995 147 Pfam Agenet domain 87 129 IPR008395 -
Arst3g01995 147 Pfam Agenet domain 14 74 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01995 Arst-Chr3 24075539 24076268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01995 23 143 PHD Transcription Factor Family AT5G58610 28.000 2.54e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01995 - - adu:107478045 153.68