Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01973 ATGGCACAATTGCCGCCAAAGATTCCAAACATGGCAAGTAATAATTGGCCTGAGTTTTCATCAAATCAAAATCATCATCACCAAAAGATGCCTTCTCTCACAAGCATTTCAACAAACACAAACCGCCACCAAAACCAACAACAGCAGCAAAACCCTTCCTGGGTTGACGAGTTTCTGGACTTCTCGTCGGCAAGGCGCGGGGCCCACCGACGGTCCATGAGCGACTCCATTTTCGTGGAATCGCCCAGGCACATTAACCACAGCAGCAGCAACGGCGACGGCGGCGAAGACGAGTTTGAGAGGTTTGATGATTATCAATTCATGAACATGTTCAGTGATGAGGTAGTTTCCGGCGGTGATAACAACACTAACAACTCCATGAATATGATGACGATGCCGCCGCCGCCGCCGCCGGCGACAATGTCGACGTCANNNNNNNNNNNNNGCATCAACGATAATGAGAGAGACACAAACAACAAAGAGATCAATAAGGATGATGATCATCATCATGATCAGCAACAAGTGAAGGTGGAATCCGATGAAGATGAAAGCCAATGCAATAATAAAGCTCAGGATAATGATGATGATAGCAGTAAGAATAACAATAATAACTCCAATGCAAATGCTGCTACTACAAATTCCAGTGAAAAAATTACAGACCCCAAGAGGGTAAAAAGGATTTTGGCTAATAGACAATCAGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGCGCAGTGTAACTTCATTACAGGCGGAAGTTTCAGTATTATCACCGCGGGTGGCATTTTTGGATCACCAACGTTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCTTTGGCACAGGACAAGATCTTCAAAGATGGTAATTGCTTTACGTATTCTCTTTTAGTTTACCTTCATAGTATCCTCCAAGATGCTATACTACTATTGTTTATTCATTTCTCTACGTAA 984 0.4278 MAQLPPKIPNMASNNWPEFSSNQNHHHQKMPSLTSISTNTNRHQNQQQQQNPSWVDEFLDFSSARRGAHRRSMSDSIFVESPRHINHSSSNGDGGEDEFERFDDYQFMNMFSDEVVSGGDNNTNNSMNMMTMPPPPPPATMSTSXXXXXINDNERDTNNKEINKDDDHHHDQQQVKVESDEDESQCNNKAQDNDDDSSKNNNNNSNANAATTNSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDGNCFTYSLLVYLHSILQDAILLLFIHFST 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01973 327 MobiDBLite consensus disorder prediction 8 53 - -
Arst3g01973 327 MobiDBLite consensus disorder prediction 114 231 - -
Arst3g01973 327 MobiDBLite consensus disorder prediction 82 101 - -
Arst3g01973 327 MobiDBLite consensus disorder prediction 1 53 - -
Arst3g01973 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Arst3g01973 327 SUPERFAMILY Leucine zipper domain 222 276 IPR046347 GO:0003700|GO:0006355
Arst3g01973 327 MobiDBLite consensus disorder prediction 154 196 - -
Arst3g01973 327 PANTHER BASIC LEUCINE ZIPPER 34 1 300 - -
Arst3g01973 327 SMART brlzneu 218 282 IPR004827 GO:0003700|GO:0006355
Arst3g01973 327 MobiDBLite consensus disorder prediction 197 217 - -
Arst3g01973 327 CDD bZIP_plant_RF2 223 273 IPR044759 GO:0003700|GO:0006355
Arst3g01973 327 MobiDBLite consensus disorder prediction 115 129 - -
Arst3g01973 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 272 IPR004827 GO:0003700|GO:0006355
Arst3g01973 327 Gene3D - 221 293 - -
Arst3g01973 327 FunFam Basic leucine zipper 61 221 294 - -
Arst3g01973 327 Pfam bZIP transcription factor 222 265 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01973 Arst-Chr3 23588216 23590550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01973 1 302 bZIP Transcription Factor Family AT3G58120 54.633 2.67e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst3g01973 bZIP_2 3.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01973 - - adu:107478184 518.464