Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01969 ATGCATCCAGCATGTGCGGCATGCAAACATCAAAGGAAGAAATGCAGTGAGAATAATTGCGTATTAGCCCCTTATTTTCCAGCAAATAGAAGCCGTGAGTTCTATGCAGTGCACAAAGTTTTTGGTGTTAGCAACATAACTAAGTTAGTGAAGAGTGCAAAGGAAGAAGACCGAAGAAGAGTTGTTGACTCATTAATTTGGGAAGCATGTTGTAGGCAAAGAGACCCTATTCATGGTCCTTATGGAGAGTACACAAAAGTTTACAATGAGTATAAGAAAGTGTTCAATGAACTTAAGATATTTAGGGGCCAAAATACTAATACTAATACTAATACTAATAATAATCATCATCATCAACTATTGCAAATGCCGTTACCATCATCTCATCATCAAGGACTAAAATCCGTACAAGATTTGATTATATGCAATAATAATAATAATAATACTAATAATGGGAATAAAGGGAAACACAAAGGTGAAGAAGTTGATAGTAATAATACTAATAATAACAATAATGGTAATAACAACTCATTGGAATATCATCATGTTCATCATGATGAGAACAAGAATGAGATTATGGACTCTTCTACTACTATTTATAATGCATATTGTTCAAATTATTTGCATGATTTGGATAATATGATGAGGCAGGAGGTAGTCATCCCCTTTCAGCAGCACTCTCAAACATACTATATTACAGGTAAGTCTTGA 711 0.3361 MHPACAACKHQRKKCSENNCVLAPYFPANRSREFYAVHKVFGVSNITKLVKSAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVFNELKIFRGQNTNTNTNTNNNHHHQLLQMPLPSSHHQGLKSVQDLIICNNNNNNTNNGNKGKHKGEEVDSNNTNNNNNGNNNSLEYHHVHHDENKNEIMDSSTTIYNAYCSNYLHDLDNMMRQEVVIPFQQHSQTYYITGKS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01969 236 ProSiteProfiles LOB domain profile. 3 105 IPR004883 -
Arst3g01969 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 154 - -
Arst3g01969 236 MobiDBLite consensus disorder prediction 147 180 - -
Arst3g01969 236 MobiDBLite consensus disorder prediction 164 178 - -
Arst3g01969 236 Pfam Lateral organ boundaries (LOB) domain 4 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01969 Arst-Chr3 23403830 23404540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01969 2 92 AS2 family AT1G06280 60.440 4.92e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst3g01969 LOB 1.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01969 - - ahf:112769909 429.869