Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01968 ATGGCAGGTCCTATCCTTCTTCGTTCTCTCTGGTCCTCCACAAGAAAATCCGCATCTTCTTTCAACTGTTCCTCTTCTCCTTCCTTTTCTTCTTCTAGATCCTTCCTCTACCGATTCAATCACTTCTCACGCGCCTTCTCTGCCGCCGCACCTGCCTCTTCCGCCACCACATCTGCATCTATCCCCGGCGGCGCACTTGACCCCAGCCGCCTCCGCAACGTCGCCGTCATTGCGCACGTCGACCATGGCAAGACTACGCTCATGGATCGCCTTCTCCGCCAGTGCGGCGCCGATATCCCCCACGAGCGCGCCATGGATTCCATCACGCTTGAGCGCGAGCGTGGAATCACTATCGCTTCCAAGGTTACGTCCATTTCGTGGAAGGAGAATGAACTGAACATGGTTGATACTCCAGGACATGCTGATTTTGGTGGCGAAGTTGAACGTGTTGTTGGTATGGTTGAAGGGGCTGTTTTGGTTGTTGATGCTGGTGAAGGTCCACTTGCTCAAACAAAATTCGTTCTTGCAAAAGCCTTAAAGTATGGTTTGCGACCTATTCTTCTGCTAAACAAAGTAGACCGCCCTGCAGTTACTGAGGAGATGTGCGATGAAGTTGAGAGCCTGGTGTTTGATCTATTTGCCAACTTGGGTGCTACAGAGGAGCAACTAGACTTTCCAGTTCTTTATGCTTCTGCTAAAGAAGGATGGGCATCTACCACGTTTACCAAGGATCCTCCTGATGAGGCAAAAAATATGTCACAATTGCTTGATGCCATTGTTTCACATGTCCCACCACCAAATGCAAACATTGATGCACCTTTCCAGATGCTGGTTTCAATGATGGAAAAGGACTTCTATCTTGGTCGAATTTTAACTGGACGCGTATATACTGGGGTTGTTCGTGTTGGTGACAGGATTCATGGATTACGTAATAAGGACTCTGTTGCTGAAAAGATTGAAGATGGAAAGGTGGTGAAACTGATGAAAAAGAAGGGTACAAACATGGTTCTAACAGAATGTGCTGGAGCTGGTGATATAATTTCAATAGCTGGCTTGGCAAGTCCATCAATAGGCCACACAGTGGCAACAGCAGAGGTTATGTCTGTATTACCCACAGTTGAATTGGATCCTCCTACAATTTCCATGACTTTTGGTGTAAATGACTCCCCATTGGCCGGTCGAGATGGTACTCATTTGACTGGAGGAAGAATTGGTGACCGACTGATGGCTGAAGCTGAAACCAACCTTGCCATAAATGTGCTTCCTGGCTTATCAGAATCATTTGAGGTTCAGGGAAGAGGAGAGCTACAGCTGGGTATCCTAATTGAGAACATGAGACGCGAGGGATTTGAATTATCTGTGTCTCCACCTAAAGTCATGTATAAAAGTGAAAATGGTCAGAAACTTGAGCCAATAGAAGAAGTCACAATTGAGGTAAATGATGAGCATGTTGGATTGGTAATGGAAGGCTTGTCTCACAGGCGAGGCGAGGTCACAGACATGGGTCCTGTGTCAGGAGCTGTTGGTCGGACTAGACTGACTTTGACTTGTCCATCAAGGGGCTTGGTTGGTTACAGGAGTGTGTTCAGTAGTGACACTCGTGGAACTGGATTCATGCATCGAGCTTTCCTTTCATATGAAAAATTTCGAGGACCTCTTGGCAATGTTAGAAAAGGAGTACTGGTCTCAATGGGTTTTGGTACAATCACAGCTCATGCATTGATGAGCTTAGAAGCACGTGGGATTCTTTTTGTAACTCCTGGAATGGAGACATATGATGGGATGATTGTGGGAGAACATTCACGAGACACAGATCTTGATATCAATCCGGTGAGAGCTAAAGAGCTTACAAATATTCGTGCTGCTACCAAGGATGAGAATGTGAAGCTGTCTCCCCCACGTCTCATGACACTTGAAGAAGCTATAGGTTATGTGGCTTCAGATGAGCTTATTGAGGTTACCCCAAAGGCCATCCGTTTACGGAAGAAATATCTTGACGTTAACAAGCGTAAGGCCATGAGCAAAAAGCCAAAGGAATGA 2040 0.4647 MAGPILLRSLWSSTRKSASSFNCSSSPSFSSSRSFLYRFNHFSRAFSAAAPASSATTSASIPGGALDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSITLERERGITIASKVTSISWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDRPAVTEEMCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPDEAKNMSQLLDAIVSHVPPPNANIDAPFQMLVSMMEKDFYLGRILTGRVYTGVVRVGDRIHGLRNKDSVAEKIEDGKVVKLMKKKGTNMVLTECAGAGDIISIAGLASPSIGHTVATAEVMSVLPTVELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKSENGQKLEPIEEVTIEVNDEHVGLVMEGLSHRRGEVTDMGPVSGAVGRTRLTLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLSYEKFRGPLGNVRKGVLVSMGFGTITAHALMSLEARGILFVTPGMETYDGMIVGEHSRDTDLDINPVRAKELTNIRAATKDENVKLSPPRLMTLEEAIGYVASDELIEVTPKAIRLRKKYLDVNKRKAMSKKPKE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01968 679 SUPERFAMILY EF-G C-terminal domain-like 470 586 IPR035647 -
Arst3g01968 679 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 68 241 - -
Arst3g01968 679 FunFam GTP-binding protein TypA 461 555 - -
Arst3g01968 679 Pfam Elongation factor Tu domain 2 288 361 IPR004161 GO:0005525
Arst3g01968 679 Gene3D Translation factors 268 372 - -
Arst3g01968 679 CDD BipA_III 378 455 IPR047043 -
Arst3g01968 679 Pfam Elongation factor Tu GTP binding domain 70 264 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 Pfam Elongation factor G C-terminus 468 551 IPR000640 -
Arst3g01968 679 FunFam Elongation factor family protein 268 372 - -
Arst3g01968 679 SUPERFAMILY EF-G C-terminal domain-like 376 459 IPR035647 -
Arst3g01968 679 Gene3D Elongation Factor G (Translational Gtpase), domain 3 379 663 - -
Arst3g01968 679 Gene3D - 69 267 IPR027417 -
Arst3g01968 679 Gene3D - 461 555 - -
Arst3g01968 679 NCBIfam translational GTPase TypA/BipA 71 671 IPR006298 GO:0003924|GO:0005525
Arst3g01968 679 FunFam GTP-binding protein TypA 556 642 - -
Arst3g01968 679 NCBIfam small GTP-binding protein domain 72 209 IPR005225 GO:0005525
Arst3g01968 679 CDD BipA_TypA_II 274 371 IPR047042 -
Arst3g01968 679 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 106 121 IPR031157 -
Arst3g01968 679 Gene3D bipa protein 556 671 IPR042116 -
Arst3g01968 679 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 69 267 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 276 IPR027417 -
Arst3g01968 679 CDD TypA_BipA 71 266 IPR047041 -
Arst3g01968 679 FunFam GTP-binding protein TypA 70 267 - -
Arst3g01968 679 SUPERFAMILY Translation proteins 216 371 IPR009000 -
Arst3g01968 679 PRINTS GTP-binding elongation factor signature 149 160 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 PRINTS GTP-binding elongation factor signature 73 86 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 PRINTS GTP-binding elongation factor signature 185 194 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 PRINTS GTP-binding elongation factor signature 113 121 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 PRINTS GTP-binding elongation factor signature 133 143 IPR000795 GO:0003924|GO:0005525
Arst3g01968 679 FunFam GTP-binding protein TypA 379 487 - -
Arst3g01968 679 CDD BipA_TypA_C 470 550 IPR035651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01968 Arst-Chr3 23312559 23323099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01968 70 194 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 2.09e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01968 K06207 - gmx:100782425 1155.97