Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01940 ATGGAATCCAATGGTGTAGACCATGCTTCCAAATTGCTTGAATCTCAAAGCCATGTATGGAACCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTGGGAATCCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATCCATCCATCGCTTGATGCGAATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATTCCCTAACCGATGCATCTAAGTTGTTGCTCAAAGACAATCCTATGAGTCTTTTTCCTTTCTTGTCTGCCATGCTTGATCCCATTTTAACAAAACCGTGGTACGATTTACCGGCATGGTTCAAAAACGATAGTCCCACATCGTTTTACATGAGGCATGGGATGGCACTTTGGGAATATGCTGGTATTGAGCCAAGACTCAATAAGTTCTTCAATGATGCCATGGAAACCGATACTCCATTTGTTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGATTCTTTGGTTGATGTGGGTGGAGGCACAGGAACTATGACTAAGGCTCTTGCTAAGGCGTTTCCACAAATGGAGTGTGTTGTGTTTGATCTTCCACATGTTGTTCATGGCTTGCAAGGAACTGGGAATCTCAAATATGTTGGAGGTGATATGTTTGACTCAATTCCTCCTTCAGATGCCATTTTCTTGAAGTTTATATTGCATGACTGGAATGATGAGAAATGTATCAAAATACTGAAGAACTGCAAAGAAGCAATCACAAGAAGCAAAGGAAGAAAAGGAAAAGTTATTGTCATTGATATGGTAGTGGATGATGAAAAGAGTGATGGAGATAATAAATCAATTGAAACCCAACTTTTCTTTGATATGTTGATGATGGTAGAAGTCAACGGAAAAGAGAGAAATGAAAAAGAATGGGCAAACTTAATTTTCTCAGCTGGTTTTAGTAGCTACAAGATAAACTTATCAGCTTTGGGATTAAGATCTCTCATTGAAATCTTTCCATAA 1086 0.3904 MESNGVDHASKLLESQSHVWNHIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQSIHRLMRILTHSGFFSKQISSKGDPESSYSLTDASKLLLKDNPMSLFPFLSAMLDPILTKPWYDLPAWFKNDSPTSFYMRHGMALWEYAGIEPRLNKFFNDAMETDTPFVSSILFDKCKGVFEGLDSLVDVGGGTGTMTKALAKAFPQMECVVFDLPHVVHGLQGTGNLKYVGGDMFDSIPPSDAIFLKFILHDWNDEKCIKILKNCKEAITRSKGRKGKVIVIDMVVDDEKSDGDNKSIETQLFFDMLMMVEVNGKERNEKEWANLIFSAGFSSYKINLSALGLRSLIEIFP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01940 361 FunFam O-methyltransferase ZRP4 108 361 - -
Arst3g01940 361 Pfam O-methyltransferase domain 130 342 IPR001077 GO:0008171
Arst3g01940 361 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Arst3g01940 361 Gene3D - 2 106 IPR036388 -
Arst3g01940 361 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Arst3g01940 361 PANTHER O-METHYLTRANSFERASE 13 345 IPR016461 GO:0008168
Arst3g01940 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Arst3g01940 361 Gene3D Vaccinia Virus protein VP39 107 361 IPR029063 -
Arst3g01940 361 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Arst3g01940 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 351 IPR029063 -
Arst3g01940 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01940 Arst-Chr3 22887264 22889619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01940 30 360 Monolignol Biosynthesis Gene Families AT5G54160 34.125 9.93e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01940 - K16040 gmx:100781008 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01940 3 22887264 22889619 Arst3g01940 3 22887264 22889619 ECH