Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01939 ATGGAATCGAATGGTGTAGACTATGCTTCCAAACTGCTTGAATCTCAAAGCCATGTATGGCACCAGATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAATTGACTTGGGAATTCCAGATGCCATACACAACCATGGCCAACCCATGCCACTCTCAAAACTCATTTCTTCTCTACAAATCCATCCCAACAAAACACAATTCATCCACCGCTTGATGCGAATTTTGACTCATTCTGGCTTTTTCTCTAAACAAATCTCTTCCAAAGGCGATCCAGAATCGAGTTATGCCCTAACCGACGCATCCATGTTGTTGCTTAAAGACAACCCCATGAGTCTTTTCCCTTACTTGTCCGCCGTATTTGATCCAATTTTAACAAAGCCGTGGTGCGAGTTGCCAGCATGGTTCAAAAATGATAGTCCCACACCGTTCTACATGACACATGGGATGGCACTTTGGGAATATGCTGGCGTTGACCCAAGACTCAATAAGCTCTTCAATGATGCCATGGAAACCGATACTCCATTTGTTTCAAGTATTTTGTTTGACAAGTGTAAGGGTGTGTTTGAAGGGTTGGAGATTTTTTAA 591 0.4247 MESNGVDYASKLLESQSHVWHQIFSFINSMSLKCAIDLGIPDAIHNHGQPMPLSKLISSLQIHPNKTQFIHRLMRILTHSGFFSKQISSKGDPESSYALTDASMLLLKDNPMSLFPYLSAVFDPILTKPWCELPAWFKNDSPTPFYMTHGMALWEYAGVDPRLNKLFNDAMETDTPFVSSILFDKCKGVFEGLEIF 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01939 196 Gene3D Vaccinia Virus protein VP39 107 196 IPR029063 -
Arst3g01939 196 Gene3D - 2 106 IPR036388 -
Arst3g01939 196 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Arst3g01939 196 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Arst3g01939 196 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Arst3g01939 196 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 196 IPR016461 GO:0008168
Arst3g01939 196 PANTHER O-METHYLTRANSFERASE 13 193 IPR016461 GO:0008168
Arst3g01939 196 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 191 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01939 Arst-Chr3 22785474 22786110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01939 30 193 Monolignol Biosynthesis Gene Families AT5G54160 28.994 2.18e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01939 - K16040 adu:107478198 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01939 3 22785474 22786110 Arst3g01939 3 22785474 22786110 ECH