Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g01929 ATGAGTGAGTCCAATGAACATGAAAACAATCATGGCAACATCATAGTGGAGGGAAGAAAAGACAGTTTAATTAGAACTTGTCCAACATGTGGTCATCACATCAAATGCCAAGATCAGGGTGGTGGAATTCATGACTTACCTGGACTTCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGATCTGATATTCACAAGCTTCACCCTTTAATTGATGAGTTCATCCCAACTCTTGAAGGAGAGAATGGAATCTGCTATACTCATCCAGAGAACTTGCCAGGAGTAAGCAAGGATGGGTTGATCCGGCACTTCTTCCACCGGCCGTCGAAAGCATACACAACCGGAACAAGGAAGAGGAGGAAGGTGAATTCGGACGAAGAGGGAAATGAAACCCGTTGGCACAAAACAGGGAAGACCAGACCAGTCTATATTAGGGGGAAGCTGAAAGGATACAAGAAAATCCTTGTTCTCTACACAAACTATGGTGGGAAGCAAAGGAAGCCAGAGAAAACCAATTGGGTGATGCACCAATACCACCTTGGCAATGATGAAGAGGAGAAAGAAGGAGAGTTGGTTGTTTCCAAAGTGTTCTACCAAACACATCCTAGACAATGTTCTTCACTCTTGATCAATAACAACAAAGACTCTTCAACAGCCGCACTTGTCAAGGGTAATAATAATAACGGGTTTGTTGAGTATTACCATTCAAATTTCATATCATTTGATCAAGGGGAACACCAACATAGATCTAGTGGGGCTCAAGTCGTCATTTCACATTTTCCTGTCCATGAAGGTGCTCCTAATTATCATTCTTTGAATCGAAAGGAGTAG 861 0.4239 MSESNEHENNHGNIIVEGRKDSLIRTCPTCGHHIKCQDQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPENLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVNSDEEGNETRWHKTGKTRPVYIRGKLKGYKKILVLYTNYGGKQRKPEKTNWVMHQYHLGNDEEEKEGELVVSKVFYQTHPRQCSSLLINNNKDSSTAALVKGNNNNGFVEYYHSNFISFDQGEHQHRSSGAQVVISHFPVHEGAPNYHSLNRKE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g01929 286 Pfam No apical meristem (NAM) protein 50 190 IPR003441 GO:0003677|GO:0006355
Arst3g01929 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 23 236 IPR044799 GO:0003700
Arst3g01929 286 MobiDBLite consensus disorder prediction 128 144 - -
Arst3g01929 286 ProSiteProfiles NAC domain profile. 49 209 IPR003441 GO:0003677|GO:0006355
Arst3g01929 286 FunFam NAC domain-containing protein 73 58 213 - -
Arst3g01929 286 Gene3D NAC domain 58 213 IPR036093 GO:0003677|GO:0006355
Arst3g01929 286 MobiDBLite consensus disorder prediction 123 144 - -
Arst3g01929 286 SUPERFAMILY NAC domain 44 209 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g01929 Arst-Chr3 22625035 22629492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g01929 25 215 NAC Transcription Factor Family AT4G28500 80.208 1.57e-111 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst3g01929 NAM 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g01929 - - gmx:100797459 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g01929 3 22625035 22629492 Arst3g01929 3 22625035 22629492 ECH
Arst10g00293 10 2496372 2499874 Arst3g01929 3 22625035 22629492 ECH